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NECEvent2014_2_7_scaffold_258_1

Organism: NECEvent2014_2_7_Veillonella_parvula-rel_39_10

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38 MC: 6
Location: comp(3..680)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=479436 species="Bacteria; Firmicut similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 226.0
  • Bit_score: 477
  • Evalue 8.60e-132
DNA polymerase III, alpha subunit n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BMN2_VEIPT similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 226.0
  • Bit_score: 477
  • Evalue 6.10e-132
DNA polymerase III subunit alpha similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 226.0
  • Bit_score: 477
  • Evalue 1.70e-132

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 678
ATGTGCTATAAAAATGCGAAGGCTATTTACGGTGATCCATTGCCACGTGTAGTACAAGAGCGTCTCGACTATGAACTAGATTGTATTATCTCCAATGGTTATGGTGTATTGTATTATATCGCTCATAAATTGGTAAAAAAATCTCTTGATGATGGGTATCTCGTAGGTTCTCGTGGTTCCGTAGGATCTTCCTTTGCAGCAACCATGTCTGAGATTACAGAGGTAAATCCATTACCGCCACATTATGTATGTCCTAATTGTAAATATTCAGAGTTCTTTGAAAAGGGTGAATATGCAGGGGGCTTTGACTTGCCTCGTAAAGATTGTCCTAAGTGTGGTCATGCGTTACAAACAAATGGTCACGATATTCCATTTGCTATCTTTCTTGGTTTTGAAGGTGACAAGGTTCCAGATATTGACCTTAACTTCTCCGGTGATTACCAAGCAAAAGCTCACAAATATACGGAAGAATTATTTGGCCGTGACAATGTATTTAAAGCCGGTACAATCGGTACAATTGCTGATAAAACTGCTTTTGGTTATGTTAAAAAATACGCCGAAATTCGAGATATACAAGCCCGCAATGGATTCTTTGAACATTTAGCGAAAGGCTTTACAAATGTAAAGAATACTACGGGACAACACCCTGGTGGTATTATGGTATGTCCTCGAGATATG
PROTEIN sequence
Length: 226
MCYKNAKAIYGDPLPRVVQERLDYELDCIISNGYGVLYYIAHKLVKKSLDDGYLVGSRGSVGSSFAATMSEITEVNPLPPHYVCPNCKYSEFFEKGEYAGGFDLPRKDCPKCGHALQTNGHDIPFAIFLGFEGDKVPDIDLNFSGDYQAKAHKYTEELFGRDNVFKAGTIGTIADKTAFGYVKKYAEIRDIQARNGFFEHLAKGFTNVKNTTGQHPGGIMVCPRDM