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NECEvent2014_2_7_scaffold_356_2

Organism: NECEvent2014_2_7_Veillonella_parvula-rel_39_10

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38 MC: 6
Location: comp(710..2545)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=686660 species="Bacteria; Fi similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 611.0
  • Bit_score: 1199
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQZ4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 611.0
  • Bit_score: 1199
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 98.7
  • Coverage: 611.0
  • Bit_score: 1190
  • Evalue 0.0

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1836
CCACGTATCAATAAGATGGGTGGTCGTGACTGGAGCAAGGTTGTTACAAAGGCAAAAAAATCCATTGATGATTTAGCAGATAAACTCGTTGAGATATATGCACAACGAGAAATCACAGAAGGTTTTGCATTCTTGCCAGATCAACCATGGCAGCAAGAGTTTGAAGATGCATTCCCCTATGAGGAAACGGAAGACCAATTACAGGCTACCGCAGAGATTAAAGAATCCATGGAAAGACCTGTTCCTATGGATCGCTTGCTCGCTGGTGATGTAGGTTTTGGTAAAACGGAAGTGGCTATGCGCGCCATTTTCAAGGCTGTTATGAGCGGAAAACAAGTAGCAGTACTTGTACCAACTACGGTTTTAGCACAGCAACATTTCCAAACTTTTTTGAATCGCTTTGCTCCATTTGGGGTGAAAGTAGATGTGCTTAATCGATTCCGAACTACATCAGAGAAAAAACAAATTCTTAAAGGCGTAGAGGATGGATCTATTGATGTTCTTATTGGAACTCATTCATTACTTAACAAAAAGGTGGTATTCAAAGACTTAGGAATGCTTGTTGTAGATGAGGAGCAACGTTTTGGGGTAGCACAAAAAGAAAAGTGGAAAGAGTGGGCTAGCAATATTGATGTACTCACTTTGAGTGCTACACCGATTCCGCGGACTTTACATATGTCCCTCGTTGGGGTTCGAGAAATGTCTGTTATCAATACTCCGCCAGAGGAGCGATTGCCTGTTCAAACCTATGTGGTGGAATACGATATGAATCTCATAGCAGATGCTATCAAACGAGAACTTGCAAGAGGTGGACAGGTCTATTTCGTATATAACCGTGTCGCGTCCATTAATCACATGGGAGAATTATTAGAATCCGCATTGCCTGGCTTGCGTTATGCTGTTGCTCATGGACAGATGACAGGCCGTCAAATTGAGGAGATTATGACCGATTTCTATGAAGGTCATTATGATGTACTCTTGTCCACGAGTATCATTGAAACCGGATTAGATATTCCTAACGCCAATACTATCATTATTTATGATGCAGACCGTTTAGGTTTATCTCAGCTATACCAAATGCGAGGCCGTGTAGGACGTTCTCGTAGACGTGCTTATGCATACTTTATGTATCGGCCAGATAAAATACTTTCAGAGGCAGCTGAAAAGCGTTTAAAAGCCATAGAGGAGTTCACCGAGCTCGGCGCAGGATTTAAGTTAGCCATGAGAGATTTAGAGATTCGCGGTGCTGGTAATCTATTAGGTTCACAGCAACATGGTAATATCGCATCCGTGGGCTTTGGCATGTACGTGAGCATGTTAGAAGAAGCGATTGCAAAGGCTCAAAATAAAGAGGTTGAGCGAGATGTATCCATTGATCCAGCTATCGACTTAGAGGTAGATGCGTTTATTGATGATGCGTATATCAAAGATAGTGCTCGTAAGATTTCTGTATACCAACGATTGTTACATATTAAATCTAAAGAGCAACTCGACGATATGACGGATGAGCTCATTGATCGCTTCGGTACACCAACCGATCCAGTAGACCGTTTGTTGCGTATTGCTCAAATTAAGGAGCAAGCACGTCTACTGGGCATTAAGAGTATCGTCCGTAGAGATAAGCAGCTCACCATCCATTGGTATGACGATTCTAAAATGGCCGATTGGGACATGGGGGCTGTACGAGAAGATTTATGGAAAAAAATGAAGTTTATGGACACCAAGCCAGCCACATTATATGTGAATCTTAATGGCATGAAAGGTTCTGTTTTGACCATTACGGAAGCGGTGATAAAGGCTCTTAGCCACAAGTCACCGACTAAGGAGGGCCTATGA
PROTEIN sequence
Length: 612
PRINKMGGRDWSKVVTKAKKSIDDLADKLVEIYAQREITEGFAFLPDQPWQQEFEDAFPYEETEDQLQATAEIKESMERPVPMDRLLAGDVGFGKTEVAMRAIFKAVMSGKQVAVLVPTTVLAQQHFQTFLNRFAPFGVKVDVLNRFRTTSEKKQILKGVEDGSIDVLIGTHSLLNKKVVFKDLGMLVVDEEQRFGVAQKEKWKEWASNIDVLTLSATPIPRTLHMSLVGVREMSVINTPPEERLPVQTYVVEYDMNLIADAIKRELARGGQVYFVYNRVASINHMGELLESALPGLRYAVAHGQMTGRQIEEIMTDFYEGHYDVLLSTSIIETGLDIPNANTIIIYDADRLGLSQLYQMRGRVGRSRRRAYAYFMYRPDKILSEAAEKRLKAIEEFTELGAGFKLAMRDLEIRGAGNLLGSQQHGNIASVGFGMYVSMLEEAIAKAQNKEVERDVSIDPAIDLEVDAFIDDAYIKDSARKISVYQRLLHIKSKEQLDDMTDELIDRFGTPTDPVDRLLRIAQIKEQARLLGIKSIVRRDKQLTIHWYDDSKMADWDMGAVREDLWKKMKFMDTKPATLYVNLNGMKGSVLTITEAVIKALSHKSPTKEGL*