ggKbase home page

NECEvent2014_2_7_scaffold_416_2

Organism: NECEvent2014_2_7_Veillonella_parvula-rel_39_10

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38 MC: 6
Location: comp(662..1447)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 261.0
  • Bit_score: 532
  • Evalue 4.40e-148
tRNA pseudouridine synthase A n=2 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L109_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 261.0
  • Bit_score: 532
  • Evalue 3.20e-148
  • rbh
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 95.8
  • Coverage: 261.0
  • Bit_score: 516
  • Evalue 5.10e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 786
ATGAGAAATATACGAATCATAGTGGCTTATGATGGTACAGATTTAGCAGGTTATCAAAAGCAACCTAATGATAAGGGGTTAACGGTACAAGGTTGTTTGGAATATGGTTTATCACGTATTTGTAATGAACCCATTCAAATTTATGGTGCCTCTCGTACGGATGCAGGTGTACATGCTAAATTTCAAGTTTGTACATTTCAAACGTCGGGGACTATACCAGTAGAAAATATTCCTCGTGCTATGATAGCTCATATTCCTAAGGATATAGTCGTTCTAGAAGCGGTAGAAATTCCGCTAGATTGGAAGCCACGGTGGAATATATACGGTAAAGAGTATGTATATACGATTCATAATCAGCTTATTGCAGATCCTTTGACGCAGCGATATCATTGGCATGTGAAAAAGCCCTTAAATATTGCTCGTATGCAGGCTGCAGGTAATGAACTAGTAGGTACGCATGACTTTACAACCCTAAAGGGAACGAACTCAACTCCGGCGGATCCTGTAAAGACAATTATGGGAATTCGTGTTGAGGCCCGAGGTTCACAGGTGACGATTTCTGTGATTGGTGATGGTTTTTTATATCATATGGTCCGCAATATTGCAGGTTTACTTGTAGATATAGGTCTTGGTCGTCGCAAGGTTGAGGCTATTAAAGGATATTTAGCCGCTAAAGACCGGCGTGCTATAGGGAAAACTGCACCTGCTCAAGGCTTATGTTTAGAAGAAATATTCTTTACTGAAGAGCGACAACAAGAGGTATTACGGAATAAATATTTTAGATGA
PROTEIN sequence
Length: 262
MRNIRIIVAYDGTDLAGYQKQPNDKGLTVQGCLEYGLSRICNEPIQIYGASRTDAGVHAKFQVCTFQTSGTIPVENIPRAMIAHIPKDIVVLEAVEIPLDWKPRWNIYGKEYVYTIHNQLIADPLTQRYHWHVKKPLNIARMQAAGNELVGTHDFTTLKGTNSTPADPVKTIMGIRVEARGSQVTISVIGDGFLYHMVRNIAGLLVDIGLGRRKVEAIKGYLAAKDRRAIGKTAPAQGLCLEEIFFTEERQQEVLRNKYFR*