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NECEvent2014_2_8_scaffold_432_5

Organism: NECEvent2014_2_8_Veillonella_parvula-rel_39_106

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 8
Location: 3251..3466

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 143
  • Evalue 1.60e-31
DNA-directed RNA polymerase subunit omega n=6 Tax=Veillonella RepID=D1BMB6_VEIPT similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 143
  • Evalue 1.10e-31
DNA-directed RNA polymerase subunit omega similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 143
  • Evalue 3.20e-32

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 216
ATGATGGTAAAACCTCCATTAAAAAAATTGGAAAGCCAAGTAGATAGCAAATATACATTGGTGACTTTAGCGGCTAAACGCGCTCGCGAATTAACAGATGGCGAACCTTGCTTAGCAGAATCTACACATGCGACTGACAAGCCTGTATCTTTGGCATTTTATGAAATTGCTGAAGGTGAAGTGACATATAAACGCACTAAAGAAGGCATTAAATAA
PROTEIN sequence
Length: 72
MMVKPPLKKLESQVDSKYTLVTLAAKRARELTDGEPCLAESTHATDKPVSLAFYEIAEGEVTYKRTKEGIK*