ggKbase home page

NECEvent2014_2_8_scaffold_857_1

Organism: NECEvent2014_2_8_Veillonella_parvula-rel_39_106

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 8
Location: comp(2..448)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 149.0
  • Bit_score: 312
  • Evalue 4.10e-82
tRNA pseudouridine synthase A n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQN8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 149.0
  • Bit_score: 312
  • Evalue 2.90e-82
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 96.0
  • Coverage: 149.0
  • Bit_score: 306
  • Evalue 4.60e-81

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Veillonella sp. 6_1_27 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 447
ATGAGAAACATACAGATCATAGTGGCTTATGATGGTACAGATTTAGCAGGTTATCAAAAGCAACCTAATGATAAGGGGTTAACGGTACAAGGATGTTTGGAATATGGTTTATCACGTATTTGTAATGAACCGATCCAAATTTATGGTGCCTCTCGTACGGATGCGGGTGTGCATGCTAAATTTCAAGTTTGTACATTTCAAACGTCGGGGACTATACCAGTAGAAAATATTCCTCGCGCCATGATAGCTCATATTCCTAAGGATATAGTCGTTCTAGAAGCGGTAGAAATTCCGCTAGATTGGAAGCCACGGTGGAATATATACGGTAAAGAATATATATATACGATTCATAATCAGGTCATTGCAGATCCTTTGACGCAACGATATCATTGGCATGTGAAAAAGCCCTTAAATATTGCTCGTATGCAGGCTGCAGGTAATGAACTA
PROTEIN sequence
Length: 149
MRNIQIIVAYDGTDLAGYQKQPNDKGLTVQGCLEYGLSRICNEPIQIYGASRTDAGVHAKFQVCTFQTSGTIPVENIPRAMIAHIPKDIVVLEAVEIPLDWKPRWNIYGKEYIYTIHNQVIADPLTQRYHWHVKKPLNIARMQAAGNEL