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NECEvent2014_2_8_scaffold_2407_1

Organism: NECEvent2014_2_8_Veillonella_parvula-rel_39_106

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 12 / 38 MC: 8
Location: comp(1..1479)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 493.0
  • Bit_score: 956
  • Evalue 1.80e-275
DNA-directed RNA polymerase subunit beta' n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQJ9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 493.0
  • Bit_score: 956
  • Evalue 1.30e-275
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 493.0
  • Bit_score: 956
  • Evalue 3.60e-276

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Taxonomy

Veillonella sp. 3_1_44 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1479
TATGAGTCTCATATCATTGGTTTGCAAGATATTCTTTATATCCGTTTACCTGATCATGGCCGTGTAGAAACAACAGCAGGTCGCTTGATCTTCAACAATGCTTTATTCCCAGAATTATGGCAATATGAGAAACGTGAAGATGGCACTTACACATTAGGTAAGGTTATGGATAAGAAAACAGTTGGTAAATTGGTTGATCAATGTTTCCAATTGTTTGGTAATGAAAAAACAGCAGAACTTTTGGACCGCATCAAGTCCTTGGGTTACTCCTTCGCACGTCGTGCAGGTATGACTGTAGCTATTGCTGATATTAAAGTACCAGAAGTTAAAACTAGTTTGTTAGATACAGCGGAGCAAGAGGTAGAAAAAGTATCTCGTATGTACCGTCGTGGTCTTATTACAGAAGAAGAACGTTATCGTAAAACTATCCAATTATGGACAAAGGCAACAGAAGATGTTACCGATGCGATGATGGATAATATGGCGTGCGATAAAGACGGCTTTAACCCTGTTTACATGATGGCTATCTCTGGTGCCCGCGGTAATAAACAACAAATTCGTCAGCTTGCTGGTATGCGTGGTTTGATGGCCGATCCATCTGGTCGTATCATCGACTTACCAATCAAGGCAAACTTTAAAGAAGGTTTGACTGTATTGGATTACTTTACATCCTCTCATGGTGCTCGTAAAGGGTTAGCCGATACAGCGCTTCGTACAGCTGACTCCGGTTACTTAACACGTCGTCTTGTTGACGTATCTCAAGACGTAATCGTTCGTGAGGACGATTGTGACGTTGTAGGTATCGATCTCGTTCGTGAACGTGCTCGTTTGGCTACATCTCCACGTCAAGCATTAGAATTGCTTAAAGATAAACTCATTGGTCGCGTTTTAGATAAAGATGTTGTGAATGCTGAAACAGGGGAACTTGTTGTACCAGCTGAAACTATCTTGGATGAACAATGCTTGGCAGATATTGCTGAAGCTGGTGTTACATCTATCGCATTGCGCGGTGCACATTTGGGCTCTGATAGCGATATTAACCATACTAACTTGGTTCAAAAAATTATTCTTGGTGAAAGCGACGATAGCATCCGTGCAACATTGAAAGAAACTATGGTTCAAAATATGTTGAACAAGGATACTGTACAAGCAATCGTTGACAGTGAAGGGGTAGAAATCTTCCCAGCTGATACACGTCTCACTGAAGAAGGTATCGAAGCTATCCTTAACTCCGATGTAAAAGAAGTACAAGTACGCAACAATGAGATCCACGGTATTGAAGTGGAAGCTATCGTTGAAGGTACTGGTGTTATCGAGCCATTAAAAGACCGTATCGTAGGTCGTATTGCAGCTGAAGAATTAGTTAACAAGGAAACTGGCGAAGTCATCGTTCCTCTTAATGGTGAAATCACAGAGGCGTTAGCTGATGAAGTTGTAAAACACTATGAAACAGTAAAAATCCGTTCCGTATTGACTTGT
PROTEIN sequence
Length: 493
YESHIIGLQDILYIRLPDHGRVETTAGRLIFNNALFPELWQYEKREDGTYTLGKVMDKKTVGKLVDQCFQLFGNEKTAELLDRIKSLGYSFARRAGMTVAIADIKVPEVKTSLLDTAEQEVEKVSRMYRRGLITEEERYRKTIQLWTKATEDVTDAMMDNMACDKDGFNPVYMMAISGARGNKQQIRQLAGMRGLMADPSGRIIDLPIKANFKEGLTVLDYFTSSHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCDVVGIDLVRERARLATSPRQALELLKDKLIGRVLDKDVVNAETGELVVPAETILDEQCLADIAEAGVTSIALRGAHLGSDSDINHTNLVQKIILGESDDSIRATLKETMVQNMLNKDTVQAIVDSEGVEIFPADTRLTEEGIEAILNSDVKEVQVRNNEIHGIEVEAIVEGTGVIEPLKDRIVGRIAAEELVNKETGEVIVPLNGEITEALADEVVKHYETVKIRSVLTC