ggKbase home page

NECEvent2014_2_8_scaffold_232_3

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: 7644..8069

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=183 Tax=Clostridium difficile RepID=C9XII5_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 141.0
  • Bit_score: 279
  • Evalue 1.50e-72
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 141.0
  • Bit_score: 279
  • Evalue 2.10e-72
rpsL; 30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 140.0
  • Bit_score: 277
  • Evalue 1.60e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 426
ATGATGCCAACAATTAACCAATTAGTTCGTAAAAGTAGAAAAGCGCTAGAGAAGAAATCTACTGCTCCAGCATTACAAAAAGGTTACAACTCTTTAAATAAGAAAGTAACTGACGCTAGTGCCCCACAAAAAAGAGGGGTTTGTACTTCAGTAAAAACAGTTACTCCTAAGAAGCCTAACTCAGCTTTAAGAAAAGTTGCCAGAGTTAGATTAACTAATGGTATAGAAGTTTCTGCTTATATACCAGGAGAAGGACACAACTTACAAGAGCATAGTGTTGTTCTTATAAGAGGAGGAAGAGTAAAAGACCTTCCAGGGGTTAGATACCATATACTAAGAGGTACTCTAGATACAGCAGGTGTTGATAAGAGAAGACAATCAAGATCTAAATACGGTGCGAAGAGACCTAAAGAAGCTAAAAAGTAA
PROTEIN sequence
Length: 142
MMPTINQLVRKSRKALEKKSTAPALQKGYNSLNKKVTDASAPQKRGVCTSVKTVTPKKPNSALRKVARVRLTNGIEVSAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHILRGTLDTAGVDKRRQSRSKYGAKRPKEAKK*