ggKbase home page

NECEvent2014_2_8_scaffold_357_2

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: 746..3406

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transport system, permease n=23 Tax=Clostridium difficile RepID=Q188Q1_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 886.0
  • Bit_score: 1730
  • Evalue 0.0
  • rbh
ABC-type transport system, permease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 886.0
  • Bit_score: 1730
  • Evalue 0.0
ABC-type transport system, permease {ECO:0000313|EMBL:CAJ67288.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostr similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 886.0
  • Bit_score: 1730
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2661
ATGAATATTCTTCAAGAATACACCTTAGACTTTGTACGACGCAATAAACGTAGTAGTATAGCTATAATGTTAGCTATATTACTTACTACAACCATGATGTCTTCTTTGTGTGGACTGTTGTATACCATGTGGACAGATTTTATAAAACTTTCAATTGAGAAAGAAGGTAACTGGCATGGTGAATTGTTTGACTATACTTATGGAAGTGACTTACCATTAATTGAAAATTTTTCTTCAGTTGATGATGTAATGGTAAAAGGACAATGGTATGTAGGCAAAATTAATGATGAGAAAAGAGATTATATAATTTATAGAAATGCTACATCAGAGTATTGGGATTCTATGCCAGAAAAGGATACTATAATAGAGGGTCGTCGACCAAATAATGCTAATGAAATTGCATTATCAAAACAATATTTTGAGAATAATCCAAGTGTAAAAATTGGTGATAAAATTACTCTCCCAATAGGAGATAGAATCCTAAATGGAAAGCCTCTTGAACCCATAGCCCCAAAATCGAAAGGGGAAAGTTTTAAAAAAATTTCAGAGGCTACATTGACAATAGTAGGAAAGGTAGATGTTTCTACTTCATCAGTAATACCTGCATATACAGCTCTTGGATATCTTGATAAAACAAGTATAAAACCTAATGATAGTATAACTGTGTACTTGCGATTTAAAAATATAAGAGACACGTATAAGGAACTTCCAAAACTTGCTAAATCATTGGGGTGGAAGACTAATGAATATGGAAAATACAATCTTAAATACAATAGTAATTATCTTTTAAAGATGTTAGTCTTTTCACCAGAACAGAAAGCATCTATGAGTAGTATATCAAAATTTTCAACTCCTATTATGTATCTTACAATAGCAATTTTTACAGTAGCCGTGTTTGTAATGGTGATTTACAACGCGTTTTCACTGTCTGCAAATGCTAGACTTACTCAGTTAGGGATATTATCTAGTGTTGGTGCATCACCAAAACAAATTAAAAGGTCTGTAGTGTTTGAAGGCTTTTTACTGACAATTATACCATTACCAATAGGTTTATTTTTAGGATGGTTATTGTGTAATAGGCTTATAGTTTATGTTAATTCAGTTAATTATCATACTGATGTTCCAGAAGTGGTATTTACTTATGGTATTCCTGCTTTTCTGCCAGCAGTTTTACTTACAATAGTAACAGTCTGGATTTCTGCACTTATACCAGCACGAAAAGTATCAAAGATATCTCCTATAGAAGCAATACGACAAGGAGATAGTGTTAAAATCAAAAAGTCGCATAAATATTCATTAGGAAAGATATTTGGAATAGAAGGAGAACTTGCATCAAACGCACTACGTGCTCGTAAAAAATCTTATCGTACTGCAACAATATCTTTAACATTATCTTTTTTATTACTTACATGTTTTTTGCATATAATTGCAAATCAAGAAGGAGCAAAAGCTGTTTATGGAAGTGATAATTATAAGGACCAAAGAGATATAGCAGTTTATTTGGAAAATAGTGAACCTGTAGAGTCTGCTTTCATTGAAAAATTAGATAATACAGAAGGTGTAAAAAGTTCACTATATTATCAAAAAATGTCTGCTTCCACTTGGCTGACTGAAAAAGATGCATCAAAAGAACTTGCGAAAAATGGAGGATTTAAAAGTATAGTTTCATCTAAAAAATACTCTCCTATAGAACGTGATGGCAAGTTTCGTATAATTTCAAATATAATTGGGCTTGATGATAAGAGTTTTACAGAATATTGTAGGCAAATTTCTGTAGACCCAAAGTTATTTTATGATACAAAAAATCCAACCTCAATTGTATATAATAAGGAGGAAGATATTAATCGTAGTACACGTAGAAATAAAGTATATATAGATTATTTAAATCTTTCAATAGGAGATAACATTAAATTAAATGAAAAAGTATATGACGAAGATAAAGGGGATTATACTTACAACATGAAAGTGGGAGCTATTACAAGCACACTTCCTAAAATAGTAGATACTAGTTCAAAATATACATTAATGCAAATAGTGCCAATGTCTATGGTGCAGGAAATATCTAAAAATTATGATGAAGTAAGTAGGTTACGTTCAAATAGGCTGATAGGAGTATTTAAAGTAAATAATCGTGAGGACATTCCTAGAGTAAGAGAAAAATTAGAGTCCATTTATAATAAAGACTATGGTTCAGGAGATTATAGTATTGAGGATGTTTTAGAAAGTGAAAAACAAAAGGCTAGTGGAATAAAGACCATGAATTTAATAGTAGGCTTTATTACAGGTTTATTGGCTATGATTGGATTATCAAATGTACTTGCTACAGTGTCAGGAAATATTAGAAGTAGACGACAAGAGTTTGCTATGTTGCGTTCTGTTGGATTATCTCCAGAAGGCATAAAAAAGATGCTTATTTTGGAAGGTTTATTCTTAGGAATTACACCATTACTACTTAGTATTCCTGTGCAAATAGGAATAGTGTATGCTTTTCTACGTATAAATGAAATATATTTTATAGAGTATTTACCATTTGCACCTATATCTACAATAATAGGTTTTACTATATTGATACTTTTTATTGTAATAGCATCATATATGACAGGATACAAGCAGTTGAAGAATGAAAATATAGTAGAATCTATAAAAAATGAAACAATATAA
PROTEIN sequence
Length: 887
MNILQEYTLDFVRRNKRSSIAIMLAILLTTTMMSSLCGLLYTMWTDFIKLSIEKEGNWHGELFDYTYGSDLPLIENFSSVDDVMVKGQWYVGKINDEKRDYIIYRNATSEYWDSMPEKDTIIEGRRPNNANEIALSKQYFENNPSVKIGDKITLPIGDRILNGKPLEPIAPKSKGESFKKISEATLTIVGKVDVSTSSVIPAYTALGYLDKTSIKPNDSITVYLRFKNIRDTYKELPKLAKSLGWKTNEYGKYNLKYNSNYLLKMLVFSPEQKASMSSISKFSTPIMYLTIAIFTVAVFVMVIYNAFSLSANARLTQLGILSSVGASPKQIKRSVVFEGFLLTIIPLPIGLFLGWLLCNRLIVYVNSVNYHTDVPEVVFTYGIPAFLPAVLLTIVTVWISALIPARKVSKISPIEAIRQGDSVKIKKSHKYSLGKIFGIEGELASNALRARKKSYRTATISLTLSFLLLTCFLHIIANQEGAKAVYGSDNYKDQRDIAVYLENSEPVESAFIEKLDNTEGVKSSLYYQKMSASTWLTEKDASKELAKNGGFKSIVSSKKYSPIERDGKFRIISNIIGLDDKSFTEYCRQISVDPKLFYDTKNPTSIVYNKEEDINRSTRRNKVYIDYLNLSIGDNIKLNEKVYDEDKGDYTYNMKVGAITSTLPKIVDTSSKYTLMQIVPMSMVQEISKNYDEVSRLRSNRLIGVFKVNNREDIPRVREKLESIYNKDYGSGDYSIEDVLESEKQKASGIKTMNLIVGFITGLLAMIGLSNVLATVSGNIRSRRQEFAMLRSVGLSPEGIKKMLILEGLFLGITPLLLSIPVQIGIVYAFLRINEIYFIEYLPFAPISTIIGFTILILFIVIASYMTGYKQLKNENIVESIKNETI*