ggKbase home page

NECEvent2014_2_8_scaffold_421_4

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(3857..4486)

Top 3 Functional Annotations

Value Algorithm Source
R3H domain protein n=188 Tax=Clostridium difficile RepID=G6BQI9_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 403
  • Evalue 1.00e-109
  • rbh
SpoIIIJ-associated RNA/ssDNA-binding protein Jag similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 403
  • Evalue 2.90e-110
Putative SpoIIIJ-associated RNA/ssDNA-binding protein Jag {ECO:0000313|EMBL:CCL31917.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 209.0
  • Bit_score: 403
  • Evalue 1.50e-109

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 630
ATGAGAAAAAGCCTAAAATTAATAAAAAGTAAGAGTAAAGAGGAAGCTATAAGTAAAGCTATAGCAGAGTTGAATTTAAAAGCAGAGGATATAGAAGTAGAAATACTTGAAAATCCAAGTAAAGGGTTTTTAGGTTTTATAGGTGCTAAAGATGGTACTTATGAAATTTTTGTTATCGAGAGGGAAGTAGATGTAGCTAAAAATTTTATAGAGGTAATGTTGAAAAATGCAAATGTTGATGCCAAAGTCAATGTATCTCAAAAAGATAATTTAATCATGGTTGATATTGAAGGCAAAGAAGCTGCAAGTTTAATTGGTAGAAGAGGGGAAACTTTAGATTCTATTCAATTTTTGACTGGATTAGCTCTTAATAAAATAAATAAAGATTCTCATACAAGAGTACTTGTAGATATAGAAAATTATAGATCAAAACGAGAAGAATCTTTAATAAGATATGCTAATAAAGTTGCTAGAGAAGTAGCGAAAACAAGAAAAACTAAAAAATTAGATTATATGAATCCATATGAGAGAAGAATAATACATTCAGCTCTTCAAAATGACAAATATGTAATTACATATAGTGAAGGAACCGATCCATATAGAAGATTAGTAATTGAGTGTAAAAGATAA
PROTEIN sequence
Length: 210
MRKSLKLIKSKSKEEAISKAIAELNLKAEDIEVEILENPSKGFLGFIGAKDGTYEIFVIEREVDVAKNFIEVMLKNANVDAKVNVSQKDNLIMVDIEGKEAASLIGRRGETLDSIQFLTGLALNKINKDSHTRVLVDIENYRSKREESLIRYANKVAREVAKTRKTKKLDYMNPYERRIIHSALQNDKYVITYSEGTDPYRRLVIECKR*