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NECEvent2014_2_8_scaffold_346_5

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(5606..6529)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix s, AraC family protein n=182 Tax=Clostridium difficile RepID=T3G2A8_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 306.0
  • Bit_score: 634
  • Evalue 4.10e-179
  • rbh
Transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 306.0
  • Bit_score: 634
  • Evalue 1.20e-179
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:EQG73888.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 306.0
  • Bit_score: 634
  • Evalue 5.70e-179

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 924
TATATGACAAATGCTAAAAGTAAAAAAGAATATCTAAATCGTATTTGCAAAGTGCAAGACTATATAGAAGAACATTTACATGAACCTCTTTCTCTTGATGAACTTTCTAATATAGCAGGTTTTTCAAAATTTCATTTTCATAGAATCTTCAAAGCAATAGAAAAAGAAACTTTGGCACAATATGTAAATAGGCTAAAACTAGAAAATGCAACTGCTTTTCTTATTCATAGAACTGACATGACTGTTACTGATATTGCACACTACTTTGGCTTTACTGATTCAGCAGTTTTCTCGAGAGCATTTAAAAATTACTATAAAATAAGCCCTATAAAATATAGAAACAATTATAGCAAGAATTGCAAAGAACCATATAAAATTTCTCAGTACAATAGAAGCATATCAAAACCTAAATGTAAGAATACTAGAGAGGTTAAAGGTGAAATTGAAATTCTAGAACTTGATAATATGAATACTATTTACACTAGGTATACTGGTTCATATGGTAATCTAACCAGTACTTTCCCAAAACTTTTAGAACGGTTATTCACATATGCAAGTGAGCAGAATCTACTTGGACTTGAAAACACACAAATATTAGCCATTTATCATGATAATCCACAATTTACACAGGAGCATCAATTAAGGACTAGTATTTGCATGACTATTCCAGATAACATTGTTGTCAAAGAGAATGACAATCTTGGCAATATGATAATACCTTCTGGAAAATATCTTGTGGGACATTTTGATATTTCAAAATCTGAATATAGTGATGCGTGGGATTTTATGTATAATGAATGGCTATCAAATGGTAATTATAAGCTACGTGCCTCCTTCCCTTTTGAAGTATATCTTAACAACCCACACAATCACCCTCAAAATAGACACTTGGTCGATATATATTTACCTATAGAACCTTTTTAA
PROTEIN sequence
Length: 308
YMTNAKSKKEYLNRICKVQDYIEEHLHEPLSLDELSNIAGFSKFHFHRIFKAIEKETLAQYVNRLKLENATAFLIHRTDMTVTDIAHYFGFTDSAVFSRAFKNYYKISPIKYRNNYSKNCKEPYKISQYNRSISKPKCKNTREVKGEIEILELDNMNTIYTRYTGSYGNLTSTFPKLLERLFTYASEQNLLGLENTQILAIYHDNPQFTQEHQLRTSICMTIPDNIVVKENDNLGNMIIPSGKYLVGHFDISKSEYSDAWDFMYNEWLSNGNYKLRASFPFEVYLNNPHNHPQNRHLVDIYLPIEPF*