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NECEvent2014_2_8_scaffold_882_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(5..967)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding s and sugar binding domain of LacI family protein n=137 Tax=Clostridium difficile RepID=C9XJB6_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 320.0
  • Bit_score: 624
  • Evalue 7.50e-176
  • rbh
ribose ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 320.0
  • Bit_score: 624
  • Evalue 2.10e-176
ABC-type transport system, sugar-family extracellular solute-binding protein {ECO:0000313|EMBL:CDS87122.1}; ABC-type transport system, sugar-familyextracellular solute-binding protein {ECO:0000313|EMB similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 320.0
  • Bit_score: 624
  • Evalue 1.10e-175

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 963
ATGAAAAAATTAATGAAACATTTAGCATTGTTGCTATCACTTGTTATGATATTTGGTTTAGTTGGTTGTTCAAATGGTGGTGACAAAGAAAAAAATGGAGAAAAGAAAATAGCAGTATTACTACCAGGTTCAACAGGTTACTTTGTAGCAACTAAACAAGGTATAGATGCAAAATCTAAAGAATTAGGTGTAAGCGTTGAATATGCAGATGCTCAATGGGATGCTAGTAAACAATTATCACAAGCTGAAGATTTTATGGCTAAAGGGGTAGACATGATTGCATTATGTGGAGTTGATTCTGCTGTAAGTGAGAGAATAGTTAAAGCTGCTCATGATTCAGACGTTCCTATAGTAGCATTTACAAATTCTATAGGAAGTAACCCAACTGGAGAATTTAAAGGTTTAGTTACATATATAGGACAAAATGAGGAAGAAACAGGAGCATTAACTGGAAAAATTGCTAAAAACTTATTAGGAGAAACTGGTGGGAAAGCTGTATTAATAGAAGGAGTACCAGGAACTACTCCACAAGTATTAAGAAAAAAAGGTCTTGAAAAAGAATTAAAAGATAGTAATATAGAAATAGTTTATAATCAAACTTCAAATTGGGAGAAAGAGCAAGCTTTAAAAGTAACAGAAGATTTAATTCAAAAGAAAACTGATTTTAATGTTATAATATGTCAAGATGATAATTCTGCTACAGGTGCAGGTCAAGCTTTAAAAGATGCTGGTCTTAAGGATAAAGTTAAAGTCATAGGTTTGGGTGGAAGTAAAGATGGATTAAAAGCTATAACTGATGGGTTAATAGATGGTACAACTTATATGTCTGCTGTAGAAGAAGGTGGATTAGTCATAGAAAAGGCATCTAAATTCCTTAAAGGTGAAAAAATAGAACCTGTTACACAAATTAAACAAGTTGAAGTTAACAAAGATAATATTTCAGAGTTCAAGGGTGAATGGTAA
PROTEIN sequence
Length: 321
MKKLMKHLALLLSLVMIFGLVGCSNGGDKEKNGEKKIAVLLPGSTGYFVATKQGIDAKSKELGVSVEYADAQWDASKQLSQAEDFMAKGVDMIALCGVDSAVSERIVKAAHDSDVPIVAFTNSIGSNPTGEFKGLVTYIGQNEEETGALTGKIAKNLLGETGGKAVLIEGVPGTTPQVLRKKGLEKELKDSNIEIVYNQTSNWEKEQALKVTEDLIQKKTDFNVIICQDDNSATGAGQALKDAGLKDKVKVIGLGGSKDGLKAITDGLIDGTTYMSAVEEGGLVIEKASKFLKGEKIEPVTQIKQVEVNKDNISEFKGEW*