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NECEvent2014_2_8_scaffold_1029_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(275..1342)

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820, ECO:0000313|EMBL:CKG75773.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostr similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 355.0
  • Bit_score: 718
  • Evalue 6.00e-204
Putative ribosome biogenesis GTPase RsgA n=2 Tax=Clostridium difficile RepID=U3WFJ7_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 355.0
  • Bit_score: 716
  • Evalue 1.20e-203
  • rbh
GTPase similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 355.0
  • Bit_score: 711
  • Evalue 1.10e-202

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1068
ATGAATGGTATGAAACAAATCAATTTACAAGACTATGGTCTAAATAGAAATTTTATTACTCAAAGTATGGAATATCATGATTTATACCTTGCTCGGATTATCTCGCAGGAAAAGAACTTTTATCAAGCTGTATGTGTAAATGGTGTACTGTTTGCAGAGGTTTCAGGAAAGCTGCGTTTTGAGGCTACTATACAATCTGATTTTCCCACAGTTGGTGATTTCGTTATGTTGGATCGTTGCAATAATAAAAATGGTAATGCTATTATTCATCATGTGCTTCATAGAAAAAGCTTGTTTGTGCGTAAGGCTGCTGGAAAGGTAAATGAGGAGCAGGTGGTTGCAGCTAATATTGACATTGTTTTTTTGTGCATGTCACTGAATAAGGATTTTAACATTCATAGATTGGAGAGGTATCTGTCTTTAACATGGGAAAGTGGAGCTATCCCAGTAGTAGTACTTACTAAATCAGACTTATGTGACAATGTGCATCGTAAATTACAAGTAGTTAATTCTATAGCCTTGGGTGTAGATGTAGTTGTTACCTCATCTATAGAGCCAGATGGTTATAAACAGATTTCTAAGTATATTAAACCAGGCTGTACTGTTGCCTTACTTGGTTCTTCAGGAGTTGGAAAATCTTCATTAATTAATTGTCTGATGGGTGGAGAATTTTTAAATACAAAGGAAATTCGCATAGATGATGATAAAGGAAGACATGCCACGACTAGACGAGAGCTATTTTTAATTTCAGGTGGTGGTATTGTTATTGACACACCAGGTATGAGAGAGTTGGGAATGTGGGATGTTTCAGAAGGTTTAGATAAAAGTTTTGCAGATATAGAAGCTTATTTCGGAAAATGTCATTTTCGTAATTGTACTCACACCTCAGAACCAGGCTGTGCTATCTGGGAAGCTATTGCTCATCAAGAACTTTCGCCTAAAAGATGGGAATCCTATCGTAGGCTTAAAACTGAAGCAGTATTTGCAGACAATAAAAGCGAATACTTAGCAAAAAAAGAAAAGAAATTTAAAAATATCTCAAAAATAAATAAGAAGATTAGAAGATAA
PROTEIN sequence
Length: 356
MNGMKQINLQDYGLNRNFITQSMEYHDLYLARIISQEKNFYQAVCVNGVLFAEVSGKLRFEATIQSDFPTVGDFVMLDRCNNKNGNAIIHHVLHRKSLFVRKAAGKVNEEQVVAANIDIVFLCMSLNKDFNIHRLERYLSLTWESGAIPVVVLTKSDLCDNVHRKLQVVNSIALGVDVVVTSSIEPDGYKQISKYIKPGCTVALLGSSGVGKSSLINCLMGGEFLNTKEIRIDDDKGRHATTRRELFLISGGGIVIDTPGMRELGMWDVSEGLDKSFADIEAYFGKCHFRNCTHTSEPGCAIWEAIAHQELSPKRWESYRRLKTEAVFADNKSEYLAKKEKKFKNISKINKKIRR*