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NECEvent2014_2_8_scaffold_563_3

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(2000..2551)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=177 Tax=Clostridium difficile RepID=C9XK72_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 358
  • Evalue 5.80e-96
  • rbh
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 358
  • Evalue 1.60e-96
Transcriptional regulator, RmlC-type {ECO:0000313|EMBL:CCL23280.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 358
  • Evalue 8.10e-96

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 552
ATGCAAAGTTTAAATGAAATAATTGCTGAAAATTTAAAAAAGATAAGGAAAGAAAAACATCTTAGTTTAGACAAGATTGCACAACTTAGTGGTGTAAGTAAGAGTATGCTATCTCAAATTGAAAAGTGTGAGGTAAATCCTACTATATCTACTTTGAAGAAAATAACTAATGGGCTAAAAATCTCATTTACATCATTGATGGAGAGGCAGGAAAGTGACATAGAATTGATTCAAAAAAGTGATATAGACCATTTTATTGAAGATAATGGAAAGTATATAAGTTATCCAATATTTCCATTTGACTCCAAAAGAAGATTTGAGATATTTATGATTGAAATAGAAGAAGGTGGAAATTTAGATTCAAATGCTGAACTTCCAGGAACACAAGAGTTTATAACTGTTTTTAGTGGCGAAGTAACCATTAAAATAAATGGAGAAGATTACATTGTATCTAGTGGAAATTCTATAAGATTTAAAGCTGATGTATCACATATATATAGAAACTCAGGCAAAGGTATAGCTAAAATGAGTATGGTAGTATATTATATATAA
PROTEIN sequence
Length: 184
MQSLNEIIAENLKKIRKEKHLSLDKIAQLSGVSKSMLSQIEKCEVNPTISTLKKITNGLKISFTSLMERQESDIELIQKSDIDHFIEDNGKYISYPIFPFDSKRRFEIFMIEIEEGGNLDSNAELPGTQEFITVFSGEVTIKINGEDYIVSSGNSIRFKADVSHIYRNSGKGIAKMSMVVYYI*