ggKbase home page

NECEvent2014_2_8_scaffold_571_3

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: 2888..3772

Top 3 Functional Annotations

Value Algorithm Source
Putative ribosome biogenesis gtpase rsga {ECO:0000313|EMBL:CAJ69465.1}; EC=3.6.1.- {ECO:0000313|EMBL:CAJ69465.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptoco similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 294.0
  • Bit_score: 582
  • Evalue 4.20e-163
Putative ribosome biogenesis GTPase RsgA n=10 Tax=Clostridium difficile RepID=T3GE94_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 294.0
  • Bit_score: 582
  • Evalue 2.30e-163
  • rbh
ATP/GTP-binding protein similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 294.0
  • Bit_score: 582
  • Evalue 8.50e-164

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 885
ATGCTAGAAGGAAAAATTATAAAGGGGATTAGTGGATTTTATTATGTAGATACTTATAATGGTATTTATGAATGTAAGGCTAGAGGGATATTTAGAAAGCAGAAAATAACACCTTTGGTTGGTGATAGAGTCAAAATAAGCATTGTTGATGAAGATGAAAAAAAGGGTATCTTAGAAGAAATCGACAGTAGAGATACAGAACTTATAAGACCTCCTATTGCAAATATAGATAAAGCATTAATAGTATTCGCAATAAAAAATCCTAAACCAAACTTATCTCTTTTAGATAGATTTATAGTTTTGGCAGAAAAAGAAAATTTAGAAACTGTAATAATCCTTACAAAAGCAGATTTAGATGATAATGATACATTAGAAACTGTTAAAAATATATATGAACTTAGTGGCTATAAAGTCATTCCTGTAAGTAATATTACTAAGTTAAATATAGATAAAGTAAAAGAAGAATTAAAAGAAAATGTAGTAGTGTTTGCAGGACCATCTGGAGTTGGAAAATCAAGCTTATTAAATGAAATAGATGAAAATTTTAAACTTCAAACAGGAGTTGTAAGTGATAAAATAAAAAGGGGAAAACATACTACTCGTCACGCTGAACTTTTAAAATTAGAATTTGGTGGAATGGTTGCAGATACACCAGGTTTTAGTTCCCTTGCCCTTGAAGATATAGAGGAAGTTGAACTTAAAGATTATTTTATAGAATTTGATAAATTTAATGATTGTAAGTTTGGTTCAAAGTGTATTCATGAAAATGAACCTAATTGTGCTATAAAAGAAGCTGTTACAAATGGAGAAATATCTAAAGAAAGATATGATAGTTATATACAGCTGCTACATGAAATAAGACAAAATAATAGTAGGAGGTATTAG
PROTEIN sequence
Length: 295
MLEGKIIKGISGFYYVDTYNGIYECKARGIFRKQKITPLVGDRVKISIVDEDEKKGILEEIDSRDTELIRPPIANIDKALIVFAIKNPKPNLSLLDRFIVLAEKENLETVIILTKADLDDNDTLETVKNIYELSGYKVIPVSNITKLNIDKVKEELKENVVVFAGPSGVGKSSLLNEIDENFKLQTGVVSDKIKRGKHTTRHAELLKLEFGGMVADTPGFSSLALEDIEEVELKDYFIEFDKFNDCKFGSKCIHENEPNCAIKEAVTNGEISKERYDSYIQLLHEIRQNNSRRY*