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NECEvent2014_2_8_scaffold_1240_2

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(912..2162)

Top 3 Functional Annotations

Value Algorithm Source
Transporter, Major Facilitator Superfamily (MFS) n=145 Tax=Clostridium difficile RepID=Q189C1_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 416.0
  • Bit_score: 784
  • Evalue 7.40e-224
  • rbh
efflux protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 416.0
  • Bit_score: 784
  • Evalue 2.10e-224
Efflux protein {ECO:0000313|EMBL:CKH66538.1}; Putative efflux protein {ECO:0000313|EMBL:CDS83875.1}; Transporter, Major Facilitator Superfamily (MFS) {ECO:0000313|EMBL:CDS83770.1}; Transporter, Major similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 416.0
  • Bit_score: 784
  • Evalue 1.00e-223

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1251
ATGGTAAAATCCTCGAACACTTTTAATAAAAACTTCAACTTGATGATATTAGGTCAAATAATCTCATTGTTTGGTGCATCAATACTTAAATTTGCTTTATCTTTATACATACTTGATATAACTGGTAAAGCAGAAATATTTGCTACTATACTAGCAGTATCTTCAATCCCAATTATAGTATTCTCCCCTATTGGTGGAGCTATTGCAGATATATTCAACAGAAGAAACTTAATGGTTATTTTTGATTTTTCAAGTAGTCTTACAGTACTAATCTTAGCAGTATTCTTATTCAACAATAATGGTTCAATATTACTTGTAGGAATTATTATGACCATATTATCAGTCATAAGCACAATGTATCAACCAACTGTTCAGTCAAGTACACCCCTTTTAGTTGATAATGAGCATTTAATGAATGCAAATGGTATTGTAGCTGGAGTTGCATCTCTTACAAATATTGCAGGACCTGTATTAGGAGGTGTCTTGTATGGTGTGATTGGAATTAATGCAATTATAGTTATAAGTTGTGTAAGTTTCTTTCTATCTGCAATTATGGAGATATTTATACAGATTCCTTTTATCAAACAAGAGCAAAACAGCAACATTATAAAAACTATATTTACTGATATAAAGGATGGTATTGTTCATATATGTAAAGAAAATAGATTTATACTAAAAATACTTTTTTTAGCTATAGCAATAAACTTATTTTTAAGCTCTATGTTAATAGTTGGTATCCCCTATATAGTAAAAATCACTATGGGAGCTAGTAACTTCTTATATGGTCTAGCAGAAGGAGCAATTTCTTTTAGTTCACTGGTAGCTGCTGTTAGTATTGGTATTTTCTCAAAACATCTAAAAATCACTAATTTGCATATTTCCTTTATTATATGTGCAGTTATGTTCATACCAATGGCGGTTTCAGTATATCCATTTATATTAAACACAGGATTTCCAGTTCCATTTTTAATCTTTATAGTATCATCTATGCTAATATTTTTTACAACGACTCTTATCTCAATATATGTTATAACAGTCACACAATTAAAAACTCCAAATGAACTCTTAGGAAAAGTAATGTCAATTCTTTTTGCAGGAACAGCAATTGCAATGCCCCTTGGTCAGGTTATGTATGGTAAACTTTTTGATTTATTATCAGATAGAGTGTACATCATTATACTAGGAGTTGGATTTATTACATTACTTATAGCATTTGTATCAAAGATAACATTGAGGAACGAAAATCTTTAG
PROTEIN sequence
Length: 417
MVKSSNTFNKNFNLMILGQIISLFGASILKFALSLYILDITGKAEIFATILAVSSIPIIVFSPIGGAIADIFNRRNLMVIFDFSSSLTVLILAVFLFNNNGSILLVGIIMTILSVISTMYQPTVQSSTPLLVDNEHLMNANGIVAGVASLTNIAGPVLGGVLYGVIGINAIIVISCVSFFLSAIMEIFIQIPFIKQEQNSNIIKTIFTDIKDGIVHICKENRFILKILFLAIAINLFLSSMLIVGIPYIVKITMGASNFLYGLAEGAISFSSLVAAVSIGIFSKHLKITNLHISFIICAVMFIPMAVSVYPFILNTGFPVPFLIFIVSSMLIFFTTTLISIYVITVTQLKTPNELLGKVMSILFAGTAIAMPLGQVMYGKLFDLLSDRVYIIILGVGFITLLIAFVSKITLRNENL*