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NECEvent2014_2_8_scaffold_2482_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: 172..1137

Top 3 Functional Annotations

Value Algorithm Source
Cell envelope-related function transcriptional attenuator common domain protein n=13 Tax=Clostridium difficile RepID=T3GBU9_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 321.0
  • Bit_score: 645
  • Evalue 3.20e-182
  • rbh
Putative penicillin-binding protein repressor {ECO:0000313|EMBL:CDS89088.1}; Transcriptional regulator, LytR family {ECO:0000313|EMBL:CDS95694.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 321.0
  • Bit_score: 644
  • Evalue 9.90e-182
penicillin-binding protein repressor similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 321.0
  • Bit_score: 642
  • Evalue 7.60e-182

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 966
TTGTCAAAATTAAAGAAATTTGTTATACTACTGGCTTTCTTGGTAGTAATATTCCCTATAAGTGTCTATGGATATTTTTATTATAAATTATCTGCTATTCATGACTCGAGCATAAGTAGTGATTTATTGAATAACAATGACCATAAAAATGAAGATGGGATAATTAACATACTACTTATGGGAACAGATGCTAGACCAAATGAAGATTCTTCAAGGTCAGATGCTATGATGATACTTACTATTGATAACAAACACAATGATATCAAACTTACATCATTAGCTCGTGATAGCTATGTAGACATCCCTGGTCATGGTAAACAAAAACTTACTCATGCTTATGCTTATGGACAAGCTGATTTATTAATACAAACAATTGAAGAGAATTTTAATATTGATATTCAAAATTATGCTTGTGTTAATTTCGAATCATTTATGTATATAATTGATGCTATTGGTGGCGTTGAGGTTACTGTTGAAAAAGGAGAAATACGAGAACTAAATAAATTTATTCCTGAAACTTATAAATGGAATAAAAGTGATGATAAAGGTAGCATACAATACATTAGAAACTCTGGAAAGCAGACTCTAAATGGATATCAGGCACTATCTTTTGCACGTATCAGACACAACGATACAGCCTTTGCTAGAGATGGCAGACAGAGACAGATTATACAAGCTATAATCAAGAAAACGGAAACTTTACCTGTTACTAAATATCCAGGTTTATTAGATGCAGTTCTTCCATATGTTAAAACTAACATGAAGCCTAATGCAATACTTTCTTTAGGAGCTCAAGTTTTAAAAATGGGCGACTTAAATATTAAGCAATTTGAATTTCCTATTGATGATGAAATTCATAGTACAGGTGGTATATATGGAAAAGCTGGATGGGTTCTTAGATTTGACCCAGATACTTTAGACATATTACACGATTTTATATTTAATGACATAGAGTTTAAACAATAA
PROTEIN sequence
Length: 322
LSKLKKFVILLAFLVVIFPISVYGYFYYKLSAIHDSSISSDLLNNNDHKNEDGIINILLMGTDARPNEDSSRSDAMMILTIDNKHNDIKLTSLARDSYVDIPGHGKQKLTHAYAYGQADLLIQTIEENFNIDIQNYACVNFESFMYIIDAIGGVEVTVEKGEIRELNKFIPETYKWNKSDDKGSIQYIRNSGKQTLNGYQALSFARIRHNDTAFARDGRQRQIIQAIIKKTETLPVTKYPGLLDAVLPYVKTNMKPNAILSLGAQVLKMGDLNIKQFEFPIDDEIHSTGGIYGKAGWVLRFDPDTLDILHDFIFNDIEFKQ*