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NECEvent2014_2_8_scaffold_1855_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: 2..1747

Top 3 Functional Annotations

Value Algorithm Source
Sensory box protein n=26 Tax=Clostridium difficile RepID=T2VT84_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 582.0
  • Bit_score: 1134
  • Evalue 0.0
  • rbh
Putative sigma-54 dependent regulatory protein {ECO:0000313|EMBL:CBE06327.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 582.0
  • Bit_score: 1130
  • Evalue 0.0
sigma-54 dependent regulatory protein similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 582.0
  • Bit_score: 1130
  • Evalue 0.0

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1746
AAATATGGAGGAATTATTATGAAGGAAATACTTGTTATTGCTCCCACTAAAGGAACCTATGAAAAATCAATTCACATAGTTAAAAAAAACAAATATAAAACTATTGATGTTGTATTTGGCAATCTAAAAGAAGGTATACCTCTTGCTGAAAAAAGTATTAATCATGGTACTAGAATTGTCATAAGCCGAGGTGGAACTTACAATATGTTAAAAGCTACTTACAATATACCTATAGTTGAAATTAAGGTAGATGCTTATGATATTATAAAAAGCTACAAAGAGGTAAAAAATTCCAATGAACCATTTGGAATAATTGGATTTAATAATGTCATCTACGGTTTCGATATTATAGAAGAAATATTGAATAAGAAAATAACTATGATTGAAATTGAAAAAGAAGAAGAAATTTATGATGCTATAGAAAAGTACAGAAAGAAAGGTATAAACACATATATAGGAGATACCACTGTTGCACATATTGTTAAGAGACTTAATTGTAAGGGAATATTAATCGAATCTAGAGAAGAAAACATACTTAGAGCCATTCAACAAGCAGAACAAATACTCGAAGCAACCAAGGATGAACAAAAAAGAAGATTACAGATAGAAGCTATGACAGATTTTGTACATGATGGAATAATAACAGTTGATAAAAATTTTAAAATAACATTATTTAATAAGAGTGCTGAAAAAATATTTGGTATAAAAAAAGAAAATGCACTTTATCATAATGTTGTAGATGTTATCCCAAACACAGTTCTTCCACAAGTAGTTGAGACTATGGAACCTCAAATTGGTGAAATACAAAATATAGGGAGTACAAAAATTATTACAAATAGAGTTCCAATCATTGTTGATGGTCAGATTCAAGGGGCTGTTTCAACATTTCAAGATAGCAAGGAGATAAGTTCTTTTGAACATACAATAAGAAGGAGCTTATTAAGCAAAGGTCTATCTGCTAAATACACTTTTGATGATATAATTCATGCTAGTAAAAAGACAAAAGATTGTATAGAACTTGCAAAAAAATATGCTTGTTATGATACTCCTATGATTATTACTGGAGAATCTGGAGTTGGTAAAGAACTATTTTGTCAAAGTATACATAACTATAGTAAGCGTAAAAATGCACCTTTTGTTGCTGTAAATTGTGCTGCCATACCTCCATCTCTAATAGAGAGTGAGTTTTTTGGTTATGAGGAAGGTTCATTTACAGGTGCTAGAAAAAAAGGTAAAGCAGGTGTATTCGAACTAGCACATGAAGGCACAATCTTCCTAGATGAAATAAGTGAAATCCCTCTTGAACTTCAAGGTCGATTATTGAGGGTATTGCAGGAAAAACAAGTTATGAGAATTGGTGGTGATAAAGTTATTCCTATAGATGTAAAAATTATCTGTGCTTCAAATAAAGACTTAAAAAATATGATGCGCAATGGTTTATTTAGACAAGACCTTTATTTTAGAATAAATATACTAACATTATATCTTCCTTCATTAAAAGAAAGAAAAGAAGATATTATAAAATTATCAGAATTTTTTATACATAAATATTCAAGCAAATACAATAAAACGCCTTTAATTATCACTCCAAATATTAAAAAGGCACTTCTTGAACGAGAATATGAAGGTAATATAAGGGAATTGGAAGGTATGATGGAAAGGGCTGTTATTGTGGAATCATTTGACTCGATTTTATTAGAAAAGCTTAGCAATGAATATACAAATAATATAGTTGATAACGATAAT
PROTEIN sequence
Length: 582
KYGGIIMKEILVIAPTKGTYEKSIHIVKKNKYKTIDVVFGNLKEGIPLAEKSINHGTRIVISRGGTYNMLKATYNIPIVEIKVDAYDIIKSYKEVKNSNEPFGIIGFNNVIYGFDIIEEILNKKITMIEIEKEEEIYDAIEKYRKKGINTYIGDTTVAHIVKRLNCKGILIESREENILRAIQQAEQILEATKDEQKRRLQIEAMTDFVHDGIITVDKNFKITLFNKSAEKIFGIKKENALYHNVVDVIPNTVLPQVVETMEPQIGEIQNIGSTKIITNRVPIIVDGQIQGAVSTFQDSKEISSFEHTIRRSLLSKGLSAKYTFDDIIHASKKTKDCIELAKKYACYDTPMIITGESGVGKELFCQSIHNYSKRKNAPFVAVNCAAIPPSLIESEFFGYEEGSFTGARKKGKAGVFELAHEGTIFLDEISEIPLELQGRLLRVLQEKQVMRIGGDKVIPIDVKIICASNKDLKNMMRNGLFRQDLYFRINILTLYLPSLKERKEDIIKLSEFFIHKYSSKYNKTPLIITPNIKKALLEREYEGNIRELEGMMERAVIVESFDSILLEKLSNEYTNNIVDNDN