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NECEvent2014_2_8_scaffold_2003_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: 39..740

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory s, gntR family protein n=109 Tax=Clostridium difficile RepID=C9XSU7_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 456
  • Evalue 1.20e-125
  • rbh
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 456
  • Evalue 3.30e-126
GntR-family transcriptional regulator {ECO:0000313|EMBL:CBE07647.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclos similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 456
  • Evalue 1.60e-125

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 702
ATGTTAAGAAATCAACCATTATATATACAAGTTGTAGATATATTAAAGCAAAAAATATTAAATAACGAATATAAAATTGATGAAAATATTCCAACAGAAAGGGAGTTAGAGCAAGAGTTTGGAGTCAGTAAAATTACTATTAGAAAAGCTATTGAGATATTAGAATCAGAAGGGTATGTAGAGAAAAAAAGTGGAAAAGGGACAAAAGTAATAAGTAATAGTCTTTTTAATAAGCTATCAAAAGCAGAGTCTTTTTCAAGTATACTTTTATCTAAAGGTCATAAGTTATCTAAAAAGACTATTTCAATTGAAAAAATAATAAATGATACAAATTCACAAGTATTTAGTATATTTGGAGAAAAATGTAGCAAGATTACTAGAATGTATTACTTAGATAGTAAGCCATATATATTTTTTACTCATTATATTCCTTTTGATGAAAATTTAACTGTTGAAAGTTTTAATAATGAAAGTTCTTTATATATGTACTTATATAGGAGAAATATAAATATAACTAGATTTGAAGATGAATTTTTTATAGAAGAATCAGAACTAGAGGTATCAAAGGCTCTAAATCTAGCTAAAGACATATTATTAGGAAGAAAAAGAAAGACCTATGATGAGAATGATAATATAGTTGAGCTATCATTTGCAAGATATAATACAGAAGTACAAAACTATGTAATTAAATACGAAATATAA
PROTEIN sequence
Length: 234
MLRNQPLYIQVVDILKQKILNNEYKIDENIPTERELEQEFGVSKITIRKAIEILESEGYVEKKSGKGTKVISNSLFNKLSKAESFSSILLSKGHKLSKKTISIEKIINDTNSQVFSIFGEKCSKITRMYYLDSKPYIFFTHYIPFDENLTVESFNNESSLYMYLYRRNINITRFEDEFFIEESELEVSKALNLAKDILLGRKRKTYDENDNIVELSFARYNTEVQNYVIKYEI*