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NECEvent2014_2_8_scaffold_2880_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(3..149)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain, rpiR family protein n=1 Tax=Clostridium difficile P37 RepID=U4YA96_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 49.0
  • Bit_score: 103
  • Evalue 6.80e-20
Transcriptional regulator, RpiR family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 49.0
  • Bit_score: 103
  • Evalue 1.90e-20
Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:EQG77985.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 49.0
  • Bit_score: 103
  • Evalue 9.60e-20

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 147
ATGAGATTAGAATCGTTAGTTAACCAAAATTATGATAATTTAAATGAAAATGATAAAATTATTATTAAACAAATATTGATTTGTCAAAGAGAATACCGTAATTTTTCGTGTGAAAAAATTGCAAATGAATGTAATGTTTCTAGAGCT
PROTEIN sequence
Length: 49
MRLESLVNQNYDNLNENDKIIIKQILICQREYRNFSCEKIANECNVSRA