ggKbase home page

NECEvent2014_2_8_scaffold_2991_2

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(719..1282)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, RpiR family n=1 Tax=Clostridium difficile CD002 RepID=U3VWR2_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 187.0
  • Bit_score: 369
  • Evalue 2.60e-99
  • rbh
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.5
  • Coverage: 187.0
  • Bit_score: 369
  • Evalue 7.20e-100
RpiR family transcriptional regulator {ECO:0000313|EMBL:CKH00994.1}; Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CEJ97918.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 187.0
  • Bit_score: 369
  • Evalue 3.60e-99

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 564
AGTGAATTTAAAAACTTTTTAGTTTTTTCATATTCAAATAGAAATGAAAGAAATAAGGAGTTTACTAAAAGTCAAAGTGATATTTTTACTGATGTTATGGATACACGAAATTTAATAAATGTAGAGAATATAGATATGTGTTTAAATGAAATACATAATTCTAAGCATATATATTTTTTTGGTGTTGGGTCTTCTAGATTAGTATGTACTGAAATGTCTCAACGTTTTTCAGCTATAGGTGTAAATGTAAAATACTATGATGATTCAACTCTCATGTATTTGGCTGCATCAAATATTACTAAAGATGACCTTGTAATTGCTGTATCTATGTCTGGAGAGACTGCTCAAGTTATTAAGGCATGTAATATAGCAAAAACAAATCAAGTTAAAGTAATTTCTCTGACAAATATAAGTGTCAATTCATTATCAAATATAGCTGATATAAAATTATTTGTATCTTCTCCACAATATAATTTTAATAGTGTTAACTATACGTCTAGAGTGCCAGCACTTTCTCTTATGGAATATATGTTTCATAAATACATTGAAAAATACAATAGATGA
PROTEIN sequence
Length: 188
SEFKNFLVFSYSNRNERNKEFTKSQSDIFTDVMDTRNLINVENIDMCLNEIHNSKHIYFFGVGSSRLVCTEMSQRFSAIGVNVKYYDDSTLMYLAASNITKDDLVIAVSMSGETAQVIKACNIAKTNQVKVISLTNISVNSLSNIADIKLFVSSPQYNFNSVNYTSRVPALSLMEYMFHKYIEKYNR*