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NECEvent2014_2_8_scaffold_3285_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: 2..724

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix s, AraC family protein n=116 Tax=Clostridium difficile RepID=T3GXY1_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 477
  • Evalue 8.50e-132
  • rbh
Transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 477
  • Evalue 2.40e-132
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CCL21910.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 240.0
  • Bit_score: 477
  • Evalue 1.20e-131

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 723
CACTATACAATATCTATTCCAGATACAAGTATTAAAGAAAATCTTACATTAATACCTGATGCTAGTGGATGTATGATATTTAAATTTGACAAAAAAGGTATAGAAAGCGCATTCTGGGGAGCCACAACAAAAACTACTATTGTAAAAAATGATATAGAAAATGTACTTTTTAGAGTATTCGTTGAGTTTCGCCCAGGTGGAGTATATTATTTGACAGGTCTTTCTCAAAGAGAATCTACAGATTTAAAAATTTCACTTGAAGATTTTAACACATTATTTAGCTTAGAGGTTAATTCCATTTTTGAAAGAACAAGTACTATAAAGGAATTAGTAGAACAATTAGATATGTTATTCTTATCATACTTATTGAAATCAAATATAGTAGATATGACTATACCAATTCTTGAAAATGCTAGAAAACAAAACTCTATTATGTCTGTTAAAAACATTTCACAAATTAGTTGTTATAGTGAACGACATTTAAATAGAATTTTTAATAATTCTCTTGGTATGAGTGTTAAATCATACCTTAGATTACTTCGTATAAACCTTGTATTACAAGAAATACAAAATAATAAAATACCCTTTGCAACTTTAGCACAAGATATTGGTTATTACGACCAATCTCATTTTATAAATGATTTTAAATCTATTTGTGGTGTTAATCCAACAACCTATATAAAAAATTTGTCCGATTTTTACAATGAAAAGTATAAATTTTGA
PROTEIN sequence
Length: 241
HYTISIPDTSIKENLTLIPDASGCMIFKFDKKGIESAFWGATTKTTIVKNDIENVLFRVFVEFRPGGVYYLTGLSQRESTDLKISLEDFNTLFSLEVNSIFERTSTIKELVEQLDMLFLSYLLKSNIVDMTIPILENARKQNSIMSVKNISQISCYSERHLNRIFNNSLGMSVKSYLRLLRINLVLQEIQNNKIPFATLAQDIGYYDQSHFINDFKSICGVNPTTYIKNLSDFYNEKYKF*