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NECEvent2014_2_8_scaffold_3335_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(32..943)

Top 3 Functional Annotations

Value Algorithm Source
Binding--dependent transport system inner membrane component family protein n=135 Tax=Clostridium difficile RepID=T3I2D9_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 303.0
  • Bit_score: 587
  • Evalue 9.60e-165
  • rbh
oppC; oligopeptide family ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 303.0
  • Bit_score: 587
  • Evalue 2.70e-165
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:EQE68471.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 303.0
  • Bit_score: 587
  • Evalue 1.40e-164

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 912
ATGAAGCCACAATATAGTGATTTTGAAATTGTAGGAGAAAATTATATTTTAGTAGCAGAAGATGAACATATAGAAACAAAGAAAACCTTATCTAAAAAAATTAAAGAATTACCATATATATCAATTATTATTTTATCAATCATAGTCATTGGAAGTGTATTCTCATCTTTTATAATGACACATGAACCAACATACATGGATTTAGCAAGTTCTAATTTAGCTCCAAATAAAACTTTTTTATTTGGAACAGACTCAATGGGTAGAGATATATATTCTATGATATGGTATGGAGGAAAAATATCTTTATTTATAGGACTATTTTCCACTGTAATATCAACTGTTATAGGAATTGTTTATGGTAGTATAAGTGGTTCAGCATCTGAACTTGTAGATGATGCAATGATGAGGTTTACAGAAATCATACTTAGTATACCTTCAATATTAATTATAATATTTGTACAAGCTATACTTGGAAATTCAAATCCAGTATCTATGTCCATAGTAATAGGGATAACAAGTTGGATGAATATATCTAAGATAGTGAGAACAGAAGTTAGACAAATAAAAAATAGCGAATACATACTAGCAGCTAAGAGCATGGGAGGAGGATTCTTCTATGTATTAAAGCAACATTTACTTCCAAATTTTGTGGCATCAATAATGTTCATGGTTGTAACAAACATAGGCGCAGCTATTGGTACTGAATCGACACTTAGCTTTTTAGGAATTGGTTTACCAATAGAAATTGTTTCTTGGGGAAGCATGTTATCTTTGTCGGAGGAAGCATTACTTTCAAATAGATGGTGGATTATACTGATTCCGGGTATATTTTTGGTTACCACATTGGTGTGTATAACAAATATAGGTAATTATATAAGAAAGAATAATAATAAAAAATCTAGTAATTTATAA
PROTEIN sequence
Length: 304
MKPQYSDFEIVGENYILVAEDEHIETKKTLSKKIKELPYISIIILSIIVIGSVFSSFIMTHEPTYMDLASSNLAPNKTFLFGTDSMGRDIYSMIWYGGKISLFIGLFSTVISTVIGIVYGSISGSASELVDDAMMRFTEIILSIPSILIIIFVQAILGNSNPVSMSIVIGITSWMNISKIVRTEVRQIKNSEYILAAKSMGGGFFYVLKQHLLPNFVASIMFMVVTNIGAAIGTESTLSFLGIGLPIEIVSWGSMLSLSEEALLSNRWWIILIPGIFLVTTLVCITNIGNYIRKNNNKKSSNL*