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NECEvent2014_2_8_scaffold_3668_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: 2..1108

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Clostridium difficile (strain 630) RepID=Q18BX5_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 366.0
  • Bit_score: 710
  • Evalue 9.20e-202
  • rbh
sigA1; RNA polymerase sigma factor SigA1 (sigma-43) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 366.0
  • Bit_score: 710
  • Evalue 2.60e-202
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostri similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 366.0
  • Bit_score: 710
  • Evalue 1.30e-201

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1107
AAAGGAGGTTTGAGTGTGGAAAATAAATCGAATAAAAAAGAGTTAAAAAAGGTTACTGCTAAGACATTAATAGAAAAAGGAAAAAAGCAAGGTTCTCTGACACTTGCAGAGATAATGGAAGCTTTTTCGGAGACTGAACTTGATAAGGATCAAGTAGAAAATCTTTATGAGACTTTAGGAAATTTGGGAATAGAAATAACAGAAACAAAAAACTATAAAGCTGATATAGATTTTTCGGTTGCTGATGACGATTTAAGTATAGGCCACTTAGATGAAGATGCAGAGGCAATTTCACATGATGACTCTTCTGCAATAGAAATAGAAACTGTGGATTTATCTTTACCAAAAGGGATAAGTATAGATGACCCTGTAAGAATGTACTTAAAAGAAATAGGAAAAATTCCTCTACTTAAACCACATGAAGAAGTAGAATTTGCTAGAAGGATGCACGAAGGTGATGAGATAGCAAAACAAAGGTTAGTTGAAGCAAACTTAAGACTAGTTGTAAGTATAGCAAAAAGATATGTAGGAAGAGGTATGCTTTTCTTGGATTTAATACAAGAGGGAAATTTAGGTCTTATAAAAGCAGTCGAAAAATTTGACTATACAAAAGGATATAAGTTTAGTACTTATGCAACATGGTGGATAAGACAAGCTATAACACGTGCTATTGCAGACCAAGCTAGAACTATAAGAATACCAGTTCATATGGTAGAGACTATAAATAAGCTAATAAGAGTATCAAGACAACTACTTCAAGAACTTGGAAGAGATCCAAAACCAGAAGAAATTGCAAAAGAAATGGAAATGACAGAAGATAAAGTAAGAGAAATAATGAAAATAGCTCAAGACCCTGTGTCTTTAGAAACACCAATAGGAGAAGAAGAAGATAGCCATTTAGGTGACTTTATTCCAGATGATGATGCTCCAGCCCCAGCAGAGGCAGCAGCATATTCTTTATTAAAAGAACAAATAGAAGATGTACTTGGTTCATTAAATGATAGAGAACAAAAAGTATTAAAGCTTAGATTTGGTCTTGAGGATGGTAGAGCCAGAACTCTTGAGGAAGTTGGAAAAGAGTTTGATGTAACTAGAGAGAGAATAAGA
PROTEIN sequence
Length: 369
KGGLSVENKSNKKELKKVTAKTLIEKGKKQGSLTLAEIMEAFSETELDKDQVENLYETLGNLGIEITETKNYKADIDFSVADDDLSIGHLDEDAEAISHDDSSAIEIETVDLSLPKGISIDDPVRMYLKEIGKIPLLKPHEEVEFARRMHEGDEIAKQRLVEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYTKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGRDPKPEEIAKEMEMTEDKVREIMKIAQDPVSLETPIGEEEDSHLGDFIPDDDAPAPAEAAAYSLLKEQIEDVLGSLNDREQKVLKLRFGLEDGRARTLEEVGKEFDVTRERIR