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NECEvent2014_2_8_scaffold_3853_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(1..996)

Top 3 Functional Annotations

Value Algorithm Source
Negative regulator of toxin gene expression n=50 Tax=Clostridium difficile RepID=Q189K7_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 236.0
  • Bit_score: 361
  • Evalue 1.20e-96
  • rbh
tcdC; Negative regulator of toxin gene expression similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 236.0
  • Bit_score: 361
  • Evalue 3.50e-97
Negative regulator of toxin gene expression {ECO:0000313|EMBL:CAJ67495.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pep similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 236.0
  • Bit_score: 361
  • Evalue 1.70e-96

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 996
ATGTTTTCTAAAAAAAATGATGGTAACGAATTTAGTAATGAAGGAAAAGGAAGCTCTAAGAAAATAATTAAATTCTTTAAGAGCACAAAGGGTATTGCTCTACTGGCATTTATTTTAGGCGTGTTTTTTGGCAATATATCCTCACCAGCTTGTTCTGAAGACCATGAGGAGGTCATTTCTAACCAAACATCAGTTATAGATTCTCAAAAAACAGAAATAGAAACTTTAAATAGCAAATTGTCTGATGCTGAACCATGGTTCAAAATGAAAGACGACGAAAAGAAAGCTATTGAAGCTGAAAATCAACGTAAAGCTGAAGAAGCTAAAAAAGCTGAAGAAGCTAAAAAGGCTGAAGAACAACGCAAAAAAGAAGAAGAGGAGAAGAAAGGATATGATACTGGTATTACTTATGACCAATTAGCTAGAACACCTGATGATTATAAGTACAAAAAGGTAAAATTTGAAGGTAAGGTTATTCAAGTTATTGAAGATGGTGATGAGGTGCAAATAAGATTAGCTGTGTCTGGAAATTATGATAAGGTTGAATCTCAAGATTTAGAAAAGATAATAACATTAATCCATCTAAACATTGAAGCTTTAACAATTCTATCAACTCTATATGTGAGAGATTATAAAGATTGTAAAGGCGCTCAATTGATTAACTTATCATCTAGAGGCGGATACATGATGGTTCCAAATGCAGTTACATACTGTGCAAGTAAATTTTATGTCAGTGCTTTTACAGAAGGCTTGGCATTGGAACTAGAGGCAAATCAACATCAATTAAAAGCTAAGGTTTTAGCTCCAGCTGCCACAAAAACGGAATTTGGTCAAGTTGCTACAGATTCTAAAGAATATGATTATGATGAGCATTTTGCTAAATATCACACAAGTGAAGAGATGGCACAATTTTTGATGGAATTATATCAAAGTGACAAAGTTGTTGGTTTAGTTGATGTTACAAATTTTGAATTTCATCTTAGCGGACCACTACTT
PROTEIN sequence
Length: 332
MFSKKNDGNEFSNEGKGSSKKIIKFFKSTKGIALLAFILGVFFGNISSPACSEDHEEVISNQTSVIDSQKTEIETLNSKLSDAEPWFKMKDDEKKAIEAENQRKAEEAKKAEEAKKAEEQRKKEEEEKKGYDTGITYDQLARTPDDYKYKKVKFEGKVIQVIEDGDEVQIRLAVSGNYDKVESQDLEKIITLIHLNIEALTILSTLYVRDYKDCKGAQLINLSSRGGYMMVPNAVTYCASKFYVSAFTEGLALELEANQHQLKAKVLAPAATKTEFGQVATDSKEYDYDEHFAKYHTSEEMAQFLMELYQSDKVVGLVDVTNFEFHLSGPLL