ggKbase home page

NECEvent2014_2_8_scaffold_1140_2

Organism: NECEvent2014_2_8_Enterococcus_faecium_38_11

near complete RP 52 / 55 MC: 4 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(365..1045)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70, region 4 n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SIP3_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 394
  • Evalue 8.90e-107
  • rbh
Sigma-70, region 4 {ECO:0000313|EMBL:EFP62591.1}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 394
  • Evalue 1.30e-106
DNA-directed RNA polymerase specialized sigma subunit similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 222.0
  • Bit_score: 204
  • Evalue 3.70e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Erysipelotrichaceae bacterium 3_1_53 → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 681
GTGTCATGGAAAGTTTTAAGCATAATCTTATACGGTCATACACTACCTAACAGCATTTTATTAACAACTGAATATCTCACAGCTTTAATAGCTCGTACAGACTATATGTTTTGTGCGGGCTTTTTTTGTACCCGAAAAAATTTTTTCATTTTTTTTCAAAATCATGCAACAAATCACACCTTGCTGTACAGATATGGTGCGGAAAGAGGGATAAACACTTTTCACGTCATAACGGAAAGGGGGTGTGATGATATGAAACCGTCGGACTTCCAAAAGACAATACAATGTCAATTTGACTGCAAGCTCAAACGTGTAGTGAAAGGCATTGTCCGTAATTATCGCAAAGAATTAAAGCGACGAAGAAATAAGGAAATTTCCTATTGTGAACTTCCAGAAATCGTCGTAGAAAAGCTGGCAGTCTGGGACGAATACGAAAGCGATTATACCGCCTTTGATGTATGTGGTATTGAGGTTCGTGTCCTTGATGATGATTTAGCAGAAGCGATTAAGTATCTGTCTGAAAAAGACAGAGAAATCTTGTTGATGTATTTCTTCTTAGGCATGAGCGATACAGAAATCGGCGACAGATTAAAGATTAACCGTTCAACGTCGTTCCGCAGTAGGAAGAACTCACTTGAAGAAATCAAGAAAAAATTAAAGGAGAACATGAATGATGAATAA
PROTEIN sequence
Length: 227
VSWKVLSIILYGHTLPNSILLTTEYLTALIARTDYMFCAGFFCTRKNFFIFFQNHATNHTLLYRYGAERGINTFHVITERGCDDMKPSDFQKTIQCQFDCKLKRVVKGIVRNYRKELKRRRNKEISYCELPEIVVEKLAVWDEYESDYTAFDVCGIEVRVLDDDLAEAIKYLSEKDREILLMYFFLGMSDTEIGDRLKINRSTSFRSRKNSLEEIKKKLKENMNDE*