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NECEvent2014_2_8_scaffold_3811_2

Organism: NECEvent2014_2_8_Staphylococcus_epidermidis_33_4_partial

partial RP 28 / 55 BSCG 22 / 51 ASCG 5 / 38
Location: comp(523..1080)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal subunit interface protein n=205 Tax=Clostridium difficile RepID=G6BCV3_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 368
  • Evalue 5.60e-99
  • rbh
sigma 54 modulation protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 368
  • Evalue 1.60e-99
Putative ribosome-associated sigma 54 modulation protein {ECO:0000313|EMBL:CCL30680.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 185.0
  • Bit_score: 368
  • Evalue 7.90e-99

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 558
ATAATAGTATCTGGGAGACAAATGAAATTAACTGACGGAATAAAAGGATACGTAGATGGAAAATTAAGTAGGTTAGAAAAATACCTTGATCCTGAATCAGAAGTGAAAGTAACAGTAAGTGCGAAAAAGGATAGACAAAAAGTGGAGGTTACAATAATTCCTATTAACGGTCAAATAATAAGAGCAGAAGATGTAGAAGATGACTTATATGCAGCAATTGATATTGTTTGTGACAAATTAAGTAGACAAGTTGTCAAATATAAAACTAAAGTTAAAGACAAAGTTCAAAATAATAAGAGCATAAGATTTGAAAATCTTGACTTTATAGATAATAGCAGTGAATTTGATGATTATGATTATGATGATGAAGAAGATGAAAATATAGTAATAGAAAGAAGAAAGAAATTTAATGTAAAACCTATGAGTTCTGAGGAGGCGATACTTCAAATGGAACTAGTAGGACACAATTTCTATATGTTTAGAAACCAAGATAATTTTGAAATAAACATAGTGTATAAGCGTAAAGCTGGTGGATATGGTTTAATAGAACAAGATTAA
PROTEIN sequence
Length: 186
IIVSGRQMKLTDGIKGYVDGKLSRLEKYLDPESEVKVTVSAKKDRQKVEVTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVVKYKTKVKDKVQNNKSIRFENLDFIDNSSEFDDYDYDDEEDENIVIERRKKFNVKPMSSEEAILQMELVGHNFYMFRNQDNFEINIVYKRKAGGYGLIEQD*