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NECEvent2014_2_8_Enterococcus_faecalis_30_4_partial

NECEvent2014_2_8_Enterococcus_faecalis_37_4
In projects: NECEvent2014_2_8

Consensus taxonomy: Enterococcus faecalis  →  Enterococcus  →  Lactobacillales  →  Bacilli  →  Firmicutes  →  Bacteria

Displaying items 301-350 of 460 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_2_8_scaffold_477 172_008_scaffold_477
Phylum: Firmicutes (80%)
5 4902 bp 32.35 4.77 86.78
NECEvent2014_2_8_scaffold_4177 172_008_scaffold_4177
Species: Enterococcus faecalis (100%)
3 1011 bp 36.30 2.67 86.65
NECEvent2014_2_8_scaffold_3620 172_008_scaffold_3620
Species: Enterococcus faecalis (100%)
2 1122 bp 39.22 3.74 86.63
NECEvent2014_2_8_scaffold_3573 172_008_scaffold_3573
Species: Enterococcus faecalis (100%)
1 1134 bp 33.60 3.44 86.51
NECEvent2014_2_8_scaffold_1910 172_008_scaffold_1910
Species: Enterococcus faecalis (66.67%)
3 1717 bp 35.64 3.32 86.49
NECEvent2014_2_8_scaffold_3210 172_008_scaffold_3210
Species: Enterococcus faecalis (100%)
2 1219 bp 41.67 4.92 86.38
NECEvent2014_2_8_scaffold_4155 172_008_scaffold_4155
Species: Enterococcus faecalis (100%)
2 1015 bp 37.73 5.02 86.31
NECEvent2014_2_8_scaffold_2967 172_008_scaffold_2967
Species: Enterococcus faecalis (100%)
2 1290 bp 33.88 2.33 86.28
NECEvent2014_2_8_scaffold_3914 172_008_scaffold_3914
Species: Enterococcus faecalis (100%)
2 1064 bp 36.84 3.95 86.28
NECEvent2014_2_8_scaffold_1293 172_008_scaffold_1293
Species: Enterococcus faecalis (100%)
4 2250 bp 35.73 3.33 86.27
NECEvent2014_2_8_scaffold_2375 172_008_scaffold_2375
Species: Enterococcus faecalis (100%)
2 1496 bp 38.97 3.21 86.23
NECEvent2014_2_8_scaffold_3809 172_008_scaffold_3809
Species: Enterococcus faecalis (100%)
2 1082 bp 40.85 3.60 86.23
NECEvent2014_2_8_scaffold_2483 172_008_scaffold_2483
Species: Enterococcus faecalis (100%)
2 1451 bp 36.46 3.10 86.22
NECEvent2014_2_8_scaffold_2555 172_008_scaffold_2555
Species: Enterococcus faecalis (100%)
2 1430 bp 37.48 3.36 86.01
NECEvent2014_2_8_scaffold_4163 172_008_scaffold_4163
Species: Enterococcus faecalis (100%)
3 1013 bp 37.02 3.26 85.88
NECEvent2014_2_8_scaffold_2403 172_008_scaffold_2403
Species: Enterococcus faecalis (100%)
2 1482 bp 38.19 4.66 85.83
NECEvent2014_2_8_scaffold_3561 172_008_scaffold_3561
Species: Enterococcus faecalis (100%)
2 1136 bp 38.73 2.64 85.83
NECEvent2014_2_8_scaffold_2679 172_008_scaffold_2679
Species: Enterococcus faecalis (100%)
3 1376 bp 38.30 3.49 85.68
NECEvent2014_2_8_scaffold_3806 172_008_scaffold_3806
Species: Enterococcus faecalis (100%)
3 1082 bp 35.86 4.30 85.67
NECEvent2014_2_8_scaffold_3161 172_008_scaffold_3161
Species: Enterococcus faecalis (100%)
2 1234 bp 35.82 3.89 85.58
NECEvent2014_2_8_scaffold_4142 172_008_scaffold_4142
Species: Enterococcus faecalis (100%)
1 1018 bp 38.61 2.95 85.46
NECEvent2014_2_8_scaffold_262 172_008_scaffold_262
Species: Enterococcus faecalis (90%)
10 9055 bp 35.15 5.27 85.41
NECEvent2014_2_8_scaffold_1446 172_008_scaffold_1446
Species: Enterococcus faecalis (100%)
2 2076 bp 39.88 3.61 85.40
NECEvent2014_2_8_scaffold_3426 172_008_scaffold_3426
Species: Enterococcus faecalis (100%)
3 1170 bp 38.97 3.33 85.38
NECEvent2014_2_8_scaffold_2898 172_008_scaffold_2898
Species: Enterococcus faecalis (100%)
3 1311 bp 36.92 3.66 85.35
NECEvent2014_2_8_scaffold_3768 172_008_scaffold_3768
Species: Enterococcus faecalis (100%)
2 1090 bp 33.85 3.58 85.32
NECEvent2014_2_8_scaffold_1932 172_008_scaffold_1932
Species: Enterococcus faecalis (50%)
2 1707 bp 39.07 4.04 85.24
NECEvent2014_2_8_scaffold_1899 172_008_scaffold_1899
Species: Enterococcus faecalis (75%)
4 1725 bp 37.80 4.17 85.22
NECEvent2014_2_8_scaffold_823 172_008_scaffold_823
Species: Enterococcus faecalis (75%)
8 3106 bp 33.13 5.07 85.09
NECEvent2014_2_8_scaffold_2559 172_008_scaffold_2559
Species: Enterococcus faecalis (66.67%)
3 1428 bp 33.89 4.62 85.08
NECEvent2014_2_8_scaffold_3086 172_008_scaffold_3086
Species: Chlamydia trachomatis (50%)
2 1252 bp 42.41 4.31 85.06
NECEvent2014_2_8_scaffold_1058 172_008_scaffold_1058
Species: Enterococcus faecalis (100%)
4 2575 bp 33.75 3.38 85.05
NECEvent2014_2_8_scaffold_1026 172_008_scaffold_1026
Species: Enterococcus faecalis (100%)
4 2632 bp 28.53 3.82 85.03
NECEvent2014_2_8_scaffold_2924 172_008_scaffold_2924
Species: Enterococcus faecalis (100%)
2 1302 bp 38.25 3.46 85.02
NECEvent2014_2_8_scaffold_4145 172_008_scaffold_4145
Species: Enterococcus faecalis (100%)
1 1018 bp 37.33 4.13 84.87
NECEvent2014_2_8_scaffold_3848 172_008_scaffold_3848
Species: Enterococcus faecalis (100%)
2 1075 bp 36.65 3.07 84.84
NECEvent2014_2_8_scaffold_4207 172_008_scaffold_4207
Species: Enterococcus faecalis (100%)
1 1005 bp 36.62 3.88 84.78
NECEvent2014_2_8_scaffold_4032 172_008_scaffold_4032
Species: Enterococcus faecalis (66.67%)
3 1038 bp 30.64 2.89 84.68
NECEvent2014_2_8_scaffold_2633 172_008_scaffold_2633
Species: Enterococcus faecalis (100%)
2 1397 bp 35.00 3.65 84.61
NECEvent2014_2_8_scaffold_3448 172_008_scaffold_3448
Species: Enterococcus faecalis (100%)
2 1163 bp 40.41 3.10 84.61
NECEvent2014_2_8_scaffold_4115 172_008_scaffold_4115
Species: Enterococcus faecalis (100%)
2 1022 bp 39.24 2.35 84.54
NECEvent2014_2_8_scaffold_2833 172_008_scaffold_2833
Species: Enterococcus faecalis (100%)
1 1332 bp 36.64 3.15 84.23
NECEvent2014_2_8_scaffold_2417 172_008_scaffold_2417
Species: Enterococcus faecalis (100%)
2 1477 bp 36.63 2.84 84.09
NECEvent2014_2_8_scaffold_1726 172_008_scaffold_1726
Species: Enterococcus faecalis (100%)
1 1834 bp 39.04 2.62 84.08
NECEvent2014_2_8_scaffold_3829 172_008_scaffold_3829
Species: Enterococcus faecalis (100%)
2 1078 bp 35.53 3.90 84.04
NECEvent2014_2_8_scaffold_2440 172_008_scaffold_2440
Species: Enterococcus faecalis (100%)
2 1467 bp 38.58 3.27 83.84
NECEvent2014_2_8_scaffold_1825 172_008_scaffold_1825
Species: Enterococcus faecalis (100%)
4 1764 bp 39.00 4.08 83.84
NECEvent2014_2_8_scaffold_1424 172_008_scaffold_1424
Species: Enterococcus faecalis (100%)
4 2097 bp 40.63 3.58 83.83
NECEvent2014_2_8_scaffold_3309 172_008_scaffold_3309
Species: Enterococcus faecalis (100%)
2 1197 bp 37.68 4.01 83.71
NECEvent2014_2_8_scaffold_1977 172_008_scaffold_1977
Species: Enterococcus faecalis (66.67%)
3 1685 bp 35.25 3.20 83.68
Displaying items 301-350 of 460 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.