ggKbase home page

NECEvent2014_3_1_scaffold_55_13

Organism: NECEvent2014_3_1_Klebsiella_oxytoca_55_88

partial RP 39 / 55 MC: 7 BSCG 34 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 11088..12137

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 349.0
  • Bit_score: 696
  • Evalue 1.40e-197
tRNA pseudouridine synthase D n=3 Tax=Klebsiella oxytoca RepID=H3LSN5_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 349.0
  • Bit_score: 698
  • Evalue 3.40e-198
  • rbh
tRNA pseudouridine 13 synthase similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 349.0
  • Bit_score: 692
  • Evalue 5.30e-197

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGATCGCTTTTGACGAACTCACTTATCTGCATGGAAAACCGCTGAGCCAGGGGCTGCTAAAAGCCAATCCGGAAGACTTTGTGGTGGTTGAGGATCTCGGCTTTGCGCCCGATGGCGAAGGCGAACATGTGCTGGTGCGTATTCTGAAAAACGGCTGTAATACCCGTTTTGTCGCTGACGCGTTGGCCAAATTCCTTAAAATTCATGCGCGCGAAGTGAGCTTTGCCGGGCAGAAAGACAAACATGCGGTGACTGAACAGTGGCTGTGCGCCCGAGTGCCGGGCAAAGAGATGCCCGACCTGAGCAAATTCCAGCTTGAAGGCTGTCAGGTACTGGAGTACGCGCGCCATAAGCGCAAGCTGCGCCTCGGGGCGCTGAAGGGGAACCAGTTTACGCTGGTGCTGCGCGAAATCAGCGATCGCGACGATGTCGAAACGCGTTTACAGGCGATTGCTGAGCATGGCGTACCCAACTATTTTGGCGCCCAGCGCTTCGGTATCGGCGGCAGTAACCTGCTGGGGGCGCTGCGCTGGGCCGAGAGCGGCGCGCCGGTGCGCGATCGCAATAAACGCAGTTTTTGGTTGTCGGCGGCCCGCAGCGCATTGTTTAATCAACAGGTTGGTATTAGATTAAAAAAACCGGAATTTAATCAGGTTGTTGATGGCGATGCGCTACAATTAGCGGGGCGCGGAAGCTGGTTCGTTGCGACCTCTGAAGAACTGACGGAGCTCCAGGCGCGGGTAAATAATCGCGAACTGATGATTACCGCTGCGCTTGTAGGTAGCGGCGACTGGGGCAGCCAGCGGGACGCGCTGGCCGCCGAACAGGCGGCCGTCGTTGAAGAGACGCAGCTACAGACGCTGCTGGTGCGTGAAAAAGTAGAGGCCGCCCGCCGGGCGATGCTGCTTTATCCCCAGCAGATGAGCTGGAACTGGTGGGATGACGTTACCGTTGAACTGCGTTTCTGGCTGCCCGCAGGCAGCTTCGCCACCAGCGTAGTAAGGGAGCTTATCAATACAACGGGTGACTATGCGAATATTGCTGAGTAA
PROTEIN sequence
Length: 350
MIAFDELTYLHGKPLSQGLLKANPEDFVVVEDLGFAPDGEGEHVLVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSKFQLEGCQVLEYARHKRKLRLGALKGNQFTLVLREISDRDDVETRLQAIAEHGVPNYFGAQRFGIGGSNLLGALRWAESGAPVRDRNKRSFWLSAARSALFNQQVGIRLKKPEFNQVVDGDALQLAGRGSWFVATSEELTELQARVNNRELMITAALVGSGDWGSQRDALAAEQAAVVEETQLQTLLVREKVEAARRAMLLYPQQMSWNWWDDVTVELRFWLPAGSFATSVVRELINTTGDYANIAE*