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NECEvent2014_3_1_scaffold_260_4

Organism: NECEvent2014_3_1_Klebsiella_oxytoca_55_88

partial RP 39 / 55 MC: 7 BSCG 34 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: 3920..6862

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=883120 species="Bacteria; Proteobacteria; Gam similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 983.0
  • Bit_score: 1885
  • Evalue 0.0
Ribonuclease E n=1 Tax=Klebsiella oxytoca MGH 28 RepID=V3NK17_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 980.0
  • Bit_score: 1896
  • Evalue 0.0
  • rbh
ribonuclease E similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 984.0
  • Bit_score: 1782
  • Evalue 0.0

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2943
GTGCAGATTGATAAAGAAGAGCGCGGCAATAAAGGCGCCGCGCTGACCACCTTTATCAGCCTGGCGGGCAGCTACCTGGTACTGATGCCGAATAACCCACGCGCTGGCGGTATTTCACGCCGTATCGAGGGTGACGATCGTACCGAGCTGAAAGAAGCGCTGGCCAGCCTTGAGCTGCCGGATGGCATGGGACTTATCGTTCGCACCGCTGGCGTCGGCAAATCCGCCGAAGCGCTGCAGTGGGACTTAAGCTTCCGCCTGAAGCACTGGGAAGCCATCCAGAAAGCCGCTGAAAGCCGCCCTGCTCCGTTCCTGATCCATCAGGAAAGTAACGTGATTGTGCGCGCTTTCCGCGACTATCTGCGTCAGGATATCGGCGAAATTCTTATCGACAACCCGAAAGTGCTTGAGCTGGCGCGCCAGCATATCGCGGCTCTTGGGCGTCCGGATTTCAGCAGCAAAATCAAGCTGTACACCGGTGAAATTCCGCTGTTCAGCCACTACCAAATCGAGTCGCAGATTGAATCCGCTTTCCAGCGTGAAGTGCGCCTGCCTTCCGGCGGTTCTATCGTAATCGACAGCACCGAAGCGCTCACCGCTATCGATATCAACTCCGCCCGTGCTACCCGCGGCGGCGACATCGAAGAAACGGCGTTTAACACCAACCTCGAAGCGGCCGATGAAATTGCTCGCCAGCTGCGCCTGCGCGACCTCGGCGGTCTGATCGTTATCGACTTCATCGATATGACCCCGGTACGTCACCAGCGTGCGGTAGAAAACCGCCTGCGCGAAGCCGTACGCCAGGACAGAGCGCGCATCCAGATCAGCCACATTTCACGCTTTGGTCTGCTGGAGATGTCGCGTCAGCGTCTGAGCCCGTCGCTTGGCGAGTCCAGCCATCACGTCTGCCCGCGCTGTAGCGGAACGGGTACCGTACGCGATAACGAATCGCTGTCGCTTTCCATTCTGCGCTTGATCGAAGAAGAAGCGCTGAAAGAGAACACTAAAGAAGTTCACGCTATCGTTCCGGTGCCGATTGCTTCGTACCTCCTGAACGAAAAACGTGCGGCGGTAAGCGCCATTGAAACCCGCCAGGCCGATGTACGCGTCATCATCGTGCCAAACGATCAGATGGAAACGCCGCACTACTCCGTTCTGCGCGTACGTAAGGGTGAAGAGACCTCCACGCTGAGCTATCTGCTGCCGAAACTGCACGAAGAAGAGATGGCTATGCCTTCTGATGAAGAGCCGGCCGAGCGTAAACTTCCGGAGCAACCGGCGCTGGCCGCTTTTGTCATGCCTGATGCCCCACCAGCGCCGGCTCAGCAAGAGCCTGCTAAAGCTACGGTTGCCGTCGGAACACCAGCCGCTTCCGCACCTGAGTCGGCAGCGCCAGCGCAGCCGGGTCTGGTTGCACGCTTCTTCAGCGCCCTGAAAAATATCTTCTCCGGCGCAGAAGAAACTAAGCCGACAGAAGTCCAGGTTGAGAAAAAAGCGGAGGAGAAATCCGAGCGCCAGCAGGAACGTCGCAAACCGCGCGCCAACAACCGCCGCGATCGCAACGACCGCCGGGATAACCGCGATAATCGTGACAACCGCGACAATCGTGCCGAGAATAGCGAAGTTCGTGAATCTCGCGAAGAAAACCGCCGTAACCGCCGCGAGAAGCAGCAGAACGTCGAACCTCGCGAAATCCGCCAGACAACGGCAGAAGATAGCGACAAGGGCAAAGCTCGCGACGATCAACCGCCGCGCCGTGAACGCAATCGCCGTCGTAACGACGATAAGCGTCAGGTTCAGCAGGAAGCTAAAGCGCAAACTCGTGAAGAACCGGTCGTACAGGATAGCGAGCAGGAAGAACGCGTGCAGACCATGCCGCGCCGCAAGCCGCGCCAGCTGTCGCAGAAGGTACGTATTGAATCTGCTGCCGCTGAGCAGGTTGTCGAGCCGGTAGCCGCGCCTCAGGTCATCGAAGCGCCAGCCGTCCAACCCGAAGCCGCAGCTCCGCGCACGGAACTGGCGAAAGTCGACCTGCCGGCGGTTGTTGAAACCGCTGCGGAACATGACGATACCGGCGAAGCACGCGAAGCTAACGGTATGCCGCGTCGTTCGCGCCGTTCCCCTCGTCACCTGCGCGTAAGCGGCCAGCGCCGTCGTCGCTACCGTGATGAGCGTTACCCGACGCAATCCCCGATGCCGCTGACCGTAGCCTGCGCATCGCCGGAAATGGCATCTGGTAAAGTGTGGATCCGTTACCCTGTCGTTCGCCCGCAGGACCAGCAGCAAGAAGAAGCGCAGGTACAGGAGTTCGCTACCACCGCGGTTGACCCCGTTATCACCCCTGCGGCCGCCGTTGAACCGGCTGTCTCTGAAGTGGTTGCCCCGGAGGTAGTTGAAGAGCGCGTTGTTGAGCCGATCGTCATCTCTGAGCCTGTGGCGGTGATGAACGAACCTGAAGCTCCGGTTGTAGAAACCACGCACCCGGAAGCTATCGCCGCACCGGTTGATGAACAGCCGCAGCTGATTGCCGAGGCTGATGAAACCGTCGCCGAAGAGGTTGTCGCAGAAGCCGTCGACGTCGTGGCAAATGAAGCTGTCGAGCCGGAAGCAGCGGTCGCTGAACCTGCTGCGGTTGAAGAAGCCGTGGCCGCTGTTGAAGAAGCGCCTGTCGTTTGCGAACCGGTGGTTGAACCGGCACCGGCGGCAGAGCCGGTAGTGAAGACTCAACCTGTTGTCACGACTGTGCCGGTCGTTAAGGTCGCCAATCGTCACGCCACCGCGCCGATGACCCGCGCGCCTGCGCCAGACTACGTCCCTGAAGCGCCTCGTCAAAGCGACTGGGTTCGCCCGAGCTTTGATTTTGACGGTAAGGGCGCTGCTGGTGGCCATAGCGCGACCCATAAAGCCGCTGCCGGGCCTACTCGTCCGCAGCCCGTAGAGTAA
PROTEIN sequence
Length: 981
VQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIETRQADVRVIIVPNDQMETPHYSVLRVRKGEETSTLSYLLPKLHEEEMAMPSDEEPAERKLPEQPALAAFVMPDAPPAPAQQEPAKATVAVGTPAASAPESAAPAQPGLVARFFSALKNIFSGAEETKPTEVQVEKKAEEKSERQQERRKPRANNRRDRNDRRDNRDNRDNRDNRAENSEVRESREENRRNRREKQQNVEPREIRQTTAEDSDKGKARDDQPPRRERNRRRNDDKRQVQQEAKAQTREEPVVQDSEQEERVQTMPRRKPRQLSQKVRIESAAAEQVVEPVAAPQVIEAPAVQPEAAAPRTELAKVDLPAVVETAAEHDDTGEAREANGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPEMASGKVWIRYPVVRPQDQQQEEAQVQEFATTAVDPVITPAAAVEPAVSEVVAPEVVEERVVEPIVISEPVAVMNEPEAPVVETTHPEAIAAPVDEQPQLIAEADETVAEEVVAEAVDVVANEAVEPEAAVAEPAAVEEAVAAVEEAPVVCEPVVEPAPAAEPVVKTQPVVTTVPVVKVANRHATAPMTRAPAPDYVPEAPRQSDWVRPSFDFDGKGAAGGHSATHKAAAGPTRPQPVE*