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NECEvent2014_3_1_scaffold_348_17

Organism: NECEvent2014_3_1_Klebsiella_oxytoca_55_88

partial RP 39 / 55 MC: 7 BSCG 34 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(13416..15863)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=883120 species="Bacteria; Proteobacteria; Gamm similarity UNIPROT
DB: UniProtKB
  • Identity: 99.9
  • Coverage: 815.0
  • Bit_score: 1622
  • Evalue 0.0
Ribonuclease R n=1 Tax=Klebsiella oxytoca MGH 28 RepID=V3P1D4_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 815.0
  • Bit_score: 1623
  • Evalue 0.0
  • rbh
exoribonuclease R similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 816.0
  • Bit_score: 1596
  • Evalue 0.0

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2448
ATGTCACAAGATCCTTTCCTGGACCGCGAATCTGAAAAATACGCTAATCCAATCCCGAGCCGGGAATTTATCCTCGATCATTTAGCAAAACGTGAAAAACCGGCCAGCCGGGATGAGCTGGCAATTGAGCTGAATATTGAAGGCGAAGAACAACAAGAAGCATTGCGCCGCAGACTGCGCGCAATGGAACGCGATGGTCAACTGGTCTTTACGCGTCGTCAGTGCTATGCGCTGCCGGAACGTCTCGATCTGCTAAAGGGGACCGTTATTGGCCACCGCGACGGTTATGGCTTCCTGCGCGTTGAAGGCCGTAAAGATGACCTTTATTTGTCGTCCGAGCAGATGAAAACCTGCATTCACGGCGATCAGGTACTGGCGCAGCCGTTAGGCGCCGACCGTAAAGGCCGCCGGGAAGCGCGTATCGTCCGCGTGCTGGTGCCCAAAACCAGCCAGATTGTGGGCCGCTACTTTACCGAAGCAGGCGTAGGCTTCGTTGTGCCTGATGACAGCCGCTTGAGCTTCGATATCCTGATTCCTCCCGAAGAGATCATGGGCGCGAGGATGGGCTTTGTAGTGGTGGTTGAGCTGACCCAGCGTCCAACCCGGCGCACCAAAGCGGTCGGCAAAATTGTTGAGGTTCTCGGCGACAACATGGGTACCGGCATGGCGGTCGATATGGCTCTGCGCACCCATGAAATCCCCTACGTCTGGCCGCCAGCAGTAGAAAAACAGGTTGCTGGCCTGAAAGAGCAGGTACCGGAAGAAGCGAAAGCCGGTCGCGTGGATTTGCGTAATCTGCCGCTGGTTACTATTGATGGCGAAGATGCCCGTGACTTTGATGATGCCGTGTACTGCGAGAAGAAACGCGGCGGCGGCTGGCGTCTGTGGGTGGCGATTGCCGATGTGAGCTACTACGTGCGTCCTGGCACGCCGCTGGATGGCGAGGCGCGCAGCCGCGGCACCTCGGTCTACTTCCCGTCGCAGGTCGTTCCCATGCTGCCTGAAGTACTCTCTAACGGCCTGTGCTCACTGAATCCTCAGGTCGACAGACTCTGTATGGTTTGTGAAATGACGATTTCGGCTAAGGGTCGTCTCACCGGCTTCAAATTCTACGAAGCGGTGATGAGCTCTCATGCCCGTCTGACCTATACCAAAGTCTGGCATATGCTGCAGGGCGATCGGGATCTGCGTGAGCAGTACGCGCCTTTGGTCAAGCACATTGAAGAGCTACACAACCTCTACAAAGTGCTGGACGGCGCGCGTGAAGAGCGTGGCGGTATCTCATTTGAGAGTGAAGAAGCTAAATTCATCTTTAATGCTGAACGTCGTATTGAACGTATTGAGCAGACTCAGCGTAACGACGCGCACAAGCTGATTGAAGAGTGCATGATCCTGGCGAACATTTCCGCGGCGCGCTTCGTTGAGAAGGCCGAGGAGCCGGCGCTGTTCCGTATCCATGACAAACCAAGCACCGAAGCGATTACCGCATTCCGTTCGGTTCTTGCAGAGCTGGGGCTTGAGCTGCCTGGCGGCAACAAGCCGGAGCCGCGCGACTATGCGCAATTACTGGAGTCTATCGCCGACCGTCCTGACGCTGAGATGCTGCAAACTATGCTGCTGCGCTCGATGAAACAGGCAGTATACGATCCGGAAAACCGCGGCCACTTTGGTCTGGCGCTGCAATCTTACGCTCACTTTACTTCGCCGATTCGCCGCTATCCTGACCTGTCGCTGCATCGCGCGATCAAGTATTTACTGGCGAAAGAGCAAGGGCATAAAGGTAATAGCACTGAGACCGGCGGCTGGCACTACAGCATGGATGAGATGCTGCAACTGGGGGCGCACTGTTCGATGACCGAGCGCCGTGCTGATGAAGCGACGCGCGATGTCTCGGACTGGTTGAAGTGTGATTTCATGTTGGATCAGGTCGGTAACGTCTTTAAGGGCGTGATTGCCAGCGTGACCGGCTTTGGTTTCTTCGTACGTCTTAATGAACTATTTATCGATGGTCTGGTGCACGTCTCTTCCCTTGATAACGATTACTACCGTTTCGACCAGGTAGGACAGCGTCTGATCGGTGAATCCGGCGGTCAAACCTATCGTCTGGGCGATCGCGTTGAAGTACGCGTTGAAGCGGTGAATATGGATGAGCGTAAAATTGATTTCTCGCTTATCTCCAGCGAGCGCGCCCCGCGCAACGTCGGTAAGACCGAGCGTGAAAAGGCGAAGAAAGGGGCGGCAGGTAAAGCTTCCGGACGTCGCCGCCAGGCTGGTAAGCAGGTAAACTTCGAGCCGGATAGCGCATTCCGTAAACCGAAAGGTCAATCCCAGCCGAAGGCCGCTCAGCCAAAAGGCGAGAAGAAAGCGAAGAAGCCGTCGGCGAAAACCCAAAAGATAGCTGCTGCGACCAAAGCCAGGCGCGCGGCGAAAAAGAAAATAGCTGAGTAA
PROTEIN sequence
Length: 816
MSQDPFLDRESEKYANPIPSREFILDHLAKREKPASRDELAIELNIEGEEQQEALRRRLRAMERDGQLVFTRRQCYALPERLDLLKGTVIGHRDGYGFLRVEGRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEAGVGFVVPDDSRLSFDILIPPEEIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTGMAVDMALRTHEIPYVWPPAVEKQVAGLKEQVPEEAKAGRVDLRNLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPGTPLDGEARSRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTISAKGRLTGFKFYEAVMSSHARLTYTKVWHMLQGDRDLREQYAPLVKHIEELHNLYKVLDGAREERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAEEPALFRIHDKPSTEAITAFRSVLAELGLELPGGNKPEPRDYAQLLESIADRPDAEMLQTMLLRSMKQAVYDPENRGHFGLALQSYAHFTSPIRRYPDLSLHRAIKYLLAKEQGHKGNSTETGGWHYSMDEMLQLGAHCSMTERRADEATRDVSDWLKCDFMLDQVGNVFKGVIASVTGFGFFVRLNELFIDGLVHVSSLDNDYYRFDQVGQRLIGESGGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTEREKAKKGAAGKASGRRRQAGKQVNFEPDSAFRKPKGQSQPKAAQPKGEKKAKKPSAKTQKIAAATKARRAAKKKIAE*