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NECEvent2014_3_1_scaffold_2268_1

Organism: NECEvent2014_3_1_Klebsiella_oxytoca_55_88

partial RP 39 / 55 MC: 7 BSCG 34 / 51 MC: 3 ASCG 12 / 38 MC: 3
Location: comp(2..1801)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 600.0
  • Bit_score: 1184
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 600.0
  • Bit_score: 1181
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=2 Tax=Klebsiella oxytoca RepID=H3N5L3_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 600.0
  • Bit_score: 1184
  • Evalue 0.0

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1800
AACCTGCTCGGTAAGCGTGTTGACTACTCCGGTCGTTCTGTAATCACCGTAGGTCCATACCTGCGTCTGCATCAGTGCGGTCTGCCGAAGAAAATGGCGCTGGAGCTGTTCAAACCGTTTATTTACGGCAAGCTGGAGCTGCGTGGCCTGGCCACCACCATCAAAGCCGCTAAGAAAATGGTTGAGCGCGAAGAAGCTGTCGTTTGGGATATCCTGGACGAAGTCATCCGCGAACACCCGGTACTGCTGAACCGTGCACCAACCTTGCACCGTCTGGGGATCCAGGCATTTGAACCAGTGCTGATCGAAGGTAAAGCTATCCAGCTGCACCCGCTGGTTTGTGCGGCATACAACGCCGACTTCGATGGTGACCAGATGGCTGTTCACGTACCGCTGACGCTGGAAGCCCAGCTCGAAGCGCGTGCGCTGATGATGTCTACTAACAACATCCTGTCTCCAGCGAACGGTGAGCCTATCATCGTTCCGTCTCAGGACGTTGTACTGGGTCTGTACTACATGACCCGTGACTGTGTTAACGCCAAAGGCGAAGGCATGGTGCTGACTGGCCCGAAAGAAGCTGAGCGTATTTATCGCGCTGGCCTGGCCTCTCTGCATGCGCGCGTTAAAGTGCGTATCACCGAATACGAAAAAGATGAAAACGGCGAATTCGTTGCGAAAACCAGCCTGAAAGATACGACCGTTGGTCGCGCCATTCTGTGGATGATCGTACCGAAAGGTCTGCCTTTCTCCATCGTCAACCAGGCGCTGGGTAAGAAGGCTATCTCTAAGATGCTGAACACCTGCTACCGTATTCTGGGCCTGAAACCGACCGTTATTTTTGCGGACCAGACGATGTACACCGGCTTTGCTTATGCAGCGCGTTCAGGTGCATCCGTTGGTATCGATGACATGGTCATCCCGGAGAAAAAATACGAAATCATCAGCGAAGCGGAAGCGGAAGTTGCTGAGATTCAGGAGCAGTTCCAGTCGGGTCTGGTGACCGCTGGCGAACGCTATAACAAAGTTATCGATATCTGGGCTGCGGCCAACGATCGTGTATCCAAAGCGATGATGGACAACCTGCAAACCGAAACCGTTATTAACCGTAACGGCGAAGAAGAGCAGCAGGTTTCCTTCAACAGCATCTACATGATGGCCGACTCCGGTGCGCGTGGTTCTGCTGCACAGATTCGTCAGCTTGCTGGTATGCGTGGTCTGATGGCGAAGCCGGATGGCTCAATCATCGAAACGCCAATCACCGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACGCACGGTGCGCGTAAAGGTCTGGCGGATACCGCACTGAAAACAGCGAACTCCGGTTACCTGACCCGTCGTCTGGTTGACGTTGCACAGGACCTGGTCGTTACTGAAGACGACTGTGGCACCCTGGAAGGCATCACCATGACCCCGGTTATCGAGGGTGGCGATGTTAAAGAGCCGCTGCGCGATCGCGTACTGGGTCGTGTGACCGCTGAAGACGTTCTGAAGCCGGGTACGGCGGACATTCTGGTTCCACGCAACACGCTGCTTCATGAGCACTGGTGCGATCTGCTGGAAGAGAACTCCGTTGACTCCGTCAAAGTGCGTTCCGTTGTATCCTGTGACACCGACTTTGGTGTATGTGCGCACTGCTACGGTCGTGACCTGGCGCGTGGCCACATCATCAACAAAGGTGAGGCTATCGGCGTTATCGCGGCACAGTCCATCGGTGAGCCGGGTACACAGCTGACGATGCGTACGTTCCACATCGGTGGTGCG
PROTEIN sequence
Length: 600
NLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAGLASLHARVKVRITEYEKDENGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKYEIISEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRNGEEEQQVSFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADILVPRNTLLHEHWCDLLEENSVDSVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGA