ggKbase home page

NECEvent2014_3_1_scaffold_1603_3

Organism: NECEvent2014_3_1_Clostridium_butyricum_28_8

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 261..1271

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 258.0
  • Bit_score: 524
  • Evalue 1.60e-145
ytzG2; RNA pseudouridine synthase YtzG (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 257.0
  • Bit_score: 326
  • Evalue 7.30e-87
Pseudouridine synthase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z360_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 258.0
  • Bit_score: 524
  • Evalue 1.10e-145
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1011
ATGAGATTAGATAAATTTTTGGCACAATCACAAATAGGTACACGAAAAATTGTAAGAGAATATGTTAAAGATGGTTTAGTAAAAATTAATGGAATAACTATTTTTGAGCCTGCAGTTGAAATTAATGAAATAGAAGATATTATTGAGTATAATGGACAAATTACTGAATATAAAGAAAAGGTATATTACATGTTTAATAAACCAAGTGGATGTATTACTGCTAGAAAAGATGCTGATGACAAGACTGTATTTGATTATTTTAAAGAGATTAATATGGATGGAGTATTTCATGTTGGAAGATTAGATAAAGATACAGAAGGATTATTACTTTTTACAAATGATGGTGATTTTAATAATAAACTTATGTCTCCTAAATTTCATGTAGATAAGAAATATTTCTTTATAGCATTAGGCAGTATAGATGAAAAAAACAAAAAAAATCTAGAAAGTGGAGTAAGCATAGGTGAAAATGAACCTATAACAAAGCCCGCTAAAATAGAAAATTTAAAAAATGGAACTTATGAAGAATTAAAAGATAAATTGAATTTAAAAAAATATTATCATGTTAATTCTGAATATTATATACAGCCAGTTGTTTGTGGACACATTACAATTTCAGAAGGACGCAGGCATCAGGTAAAGAGAATGCTTAAAAGTATTGGCTGCCATGTTATTTATCTTAAAAGAATGTCAATTGGAAATTTGGCTCTTGATGAGTTTTTAAAAAAGGGAGACTACAGAAGTCTTACGAAGGATGAAATAAAGATTTTATATTGATACATTTTAATTATAGGATATAGGGGAGTGTTATGTATGAGTAAAAAATTATGTCCAAAATGTGGTTCTGAAAAAATCATTCCTATACTTTATGGATATCCAACAAAAGAAATGTTTGAAGATAGTGATAATGATGAGTGTATTTTAGGTGGTTGTTGTATTGCTTCTACTGAAGAGGCAGAAAACTTGCTGAATAAATACCATTGCAGAGAATGTGGATTTGAGTGGAAGTAG
PROTEIN sequence
Length: 337
MRLDKFLAQSQIGTRKIVREYVKDGLVKINGITIFEPAVEINEIEDIIEYNGQITEYKEKVYYMFNKPSGCITARKDADDKTVFDYFKEINMDGVFHVGRLDKDTEGLLLFTNDGDFNNKLMSPKFHVDKKYFFIALGSIDEKNKKNLESGVSIGENEPITKPAKIENLKNGTYEELKDKLNLKKYYHVNSEYYIQPVVCGHITISEGRRHQVKRMLKSIGCHVIYLKRMSIGNLALDEFLKKGDYRSLTKDEIKILY*YILIIGYRGVLCMSKKLCPKCGSEKIIPILYGYPTKEMFEDSDNDECILGGCCIASTEEAENLLNKYHCRECGFEWK*