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NECEvent2014_3_1_scaffold_417_3

Organism: NECEvent2014_3_1_Staphylococcus_epidermidis_32_8

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 1945..2481

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA-directed RNA polymerase subunit delta n=30 Tax=Staphylococcus epidermidis RepID=C5QCX0_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 356
  • Evalue 2.10e-95
  • rbh
HB1, ASXL, restriction endonuclease HTH domain protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 356
  • Evalue 6.00e-96
Probable DNA-directed RNA polymerase subunit delta {ECO:0000256|HAMAP-Rule:MF_00357, ECO:0000256|SAAS:SAAS00194236}; RNAP delta factor {ECO:0000256|HAMAP-Rule:MF_00357}; TaxID=525375 species="Bacteria similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 356
  • Evalue 3.00e-95

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 537
ATGAAAATTCAAGATTACACAAAAGAAATGGTTGATGAGAAATCATTCATCGATATGGCCTATACTTTATTAAATGATAAACAAACAACGATGAATTTATATGATATTATTGATGAATTTAAATCTTTAGGCGGATATGAGTATGAAGATATTGAAAATCGAATCGTACAATTCTATACCGATTTAAACACTGATGGTCGTTTTTTAAATGTAGGAGAAAATCTTTGGGGTCTACGTGATTGGTACTCTGTAGATGATATTGAGGAAAAAATCGCACCAACAATTCAAAAATTCGATATTCTAGATGACGAAGATGAAGAAGATCAAAACCTTAAATTATTAGGTGATGACGACGCTGATGAAGATGACGATATTCCTGCTCAAACAGATGATCAAGAAACATTAGACGAGTCAGATAATGATGAAGATGATGTTGAAATGAATGATGCAGATATCGTTATTGATGAAGACGAAGACGAAGATATTGCTGAAGGTGAAGAAGAAGCCTTTGAAGACGCCGAAGACTTTAATGATTAA
PROTEIN sequence
Length: 179
MKIQDYTKEMVDEKSFIDMAYTLLNDKQTTMNLYDIIDEFKSLGGYEYEDIENRIVQFYTDLNTDGRFLNVGENLWGLRDWYSVDDIEEKIAPTIQKFDILDDEDEEDQNLKLLGDDDADEDDDIPAQTDDQETLDESDNDEDDVEMNDADIVIDEDEDEDIAEGEEEAFEDAEDFND*