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NECEvent2014_3_1_scaffold_417_9

Organism: NECEvent2014_3_1_Staphylococcus_epidermidis_32_8

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 10032..11348

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1403935 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 438.0
  • Bit_score: 859
  • Evalue 2.70e-246
Transcription termination factor Rho n=54 Tax=Staphylococcus epidermidis RepID=Q5HMA1_STAEQ similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 438.0
  • Bit_score: 859
  • Evalue 1.90e-246
  • rbh
Transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 438.0
  • Bit_score: 859
  • Evalue 5.40e-247

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Taxonomy

Staphylococcus sp. DORA_6_22 → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1317
ATGCCTGGTAGAGAACGAACATCTCCGCAGTATGAATCTTTCCACGAATTATATAAAAACAATACTACTAAAGAGCTCACTCAAAAAGCCAAATCTTTAAAATTAACTAATTACAGTAAATTAAATAAAAAAGAATTGGTACTTGCCATTATGGAAGCACAAATGGAAAAAGATGGTAATTACTATATGGAAGGAATATTAGATGATATTCAACAAGATGGATATGGTTTCTTAAGAACCGTTAACTATTCTAAAGGTGAGAAGGATATTTATATTTCTGCAAGCCAAATTCGACGTTTTGAAATAAAACGTGGTGATAAAGTAACGGGTAAAGTTCGTAAACCAAAAGATAATGAAAAATATTATGGTCTACTTCAAGTTGATTTTGTAAACGACCATAATGCAGAAGAAGTCAAAAAACGTCCTCACTTCCAAGCTTTAACACCTCTTTATCCGGAAGAAAGAATCCTATTAGAAACGCAATCTACAAATTATTCCACTCGTATTATGGATTTAGTCACACCAATAGGTCTTGGTCAACGTGGTCTTATAGTTGCACCACCTAAAGCTGGTAAGACAAGTTTATTAAAAGAAATCGCTAACGCAATAGCGAGTAATAAACCGGAAGCGAATTTATTTATATTACTAGTAGGTGAGCGTCCAGAAGAAGTGACGGATATTGAAAGATCGGTTGAATCTGCAGAAGTCGTTCATTCGACTTTCGATGAACCACCAGAACACCATGTTAAAGTTGCTGAATTATTATTAGAGCGTGCAAAACGATTAGTTGAAATTGGAGAAGATGTAATTATACTTATGGACTCCATAACACGTTTGGCACGAGCATATAATCTAGTCATACCACCTAGTGGACGTACATTGTCAGGTGGGCTTGATCCCGCTTCATTACACAAACCTAAAGCGTTTTTCGGTGCAGCACGTAACATTGAAGCTGGGGGAAGTTTGACAATTTTAGCTACTGCTTTAGTTGAGACAGGATCTCGTATGGATGATATGATCTATGAAGAGTTCAAGGGTACAGGTAATATGGAATTACATCTTGATCGTAAGTTATCAGAACGTAGAATATTCCCAGCGATAGACATAGGTCGTAGTTCAACACGAAAAGAAGAGCTATTAATCACTAAAGCGGAATTAGATTCATTATGGCAATTACGAAATTTATTTACTGATTCAACAGACTTTACAGAACGTTTTATTAGAAAACTTAAGCGTTCGAAAAATAATGAAGAATTCTTTAAGCAATTGCAAAAAGCAGCTGAAGAGAGTACTAAAACTGGAAGACCAATTATTTAA
PROTEIN sequence
Length: 439
MPGRERTSPQYESFHELYKNNTTKELTQKAKSLKLTNYSKLNKKELVLAIMEAQMEKDGNYYMEGILDDIQQDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEKYYGLLQVDFVNDHNAEEVKKRPHFQALTPLYPEERILLETQSTNYSTRIMDLVTPIGLGQRGLIVAPPKAGKTSLLKEIANAIASNKPEANLFILLVGERPEEVTDIERSVESAEVVHSTFDEPPEHHVKVAELLLERAKRLVEIGEDVIILMDSITRLARAYNLVIPPSGRTLSGGLDPASLHKPKAFFGAARNIEAGGSLTILATALVETGSRMDDMIYEEFKGTGNMELHLDRKLSERRIFPAIDIGRSSTRKEELLITKAELDSLWQLRNLFTDSTDFTERFIRKLKRSKNNEEFFKQLQKAAEESTKTGRPII*