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NECEvent2014_3_1_Klebsiella_pneumoniae-rel_54_6_hint

NECEvent2014_3_1_Enterobacteriales_54_6
In projects: NECEvent2014_3_1

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_3_1_UNK

Properties

Avg. coverage: 6.06 Longest contig: 9.92 Kbp Bin length: 135.60 Kbp GC content: 54.10 %
Contigs count: 72 Features count: 181 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 1 / 55 BSCG 1 / 51 ASCG 2 / 38
Displaying items 1-50 of 72 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_1_scaffold_626 173_005_scaffold_626
Genus: Enterobacter (50%)
12 9916 bp 48.18 5.81 84.65
NECEvent2014_3_1_scaffold_649 173_005_scaffold_649
Species: Klebsiella pneumoniae (66.67%)
12 9393 bp 55.23 10.35 73.87
PLASMID Jill Banfield (12/14/15)
NECEvent2014_3_1_scaffold_1178 173_005_scaffold_1178
Species: Klebsiella pneumoniae (60%)
5 4107 bp 49.26 4.89 89.12
NECEvent2014_3_1_scaffold_1180 173_005_scaffold_1180
Order: Enterobacteriales (80%)
5 4100 bp 48.54 5.41 95.41
NECEvent2014_3_1_scaffold_1272 173_005_scaffold_1272
Order: Enterobacteriales (100%)
5 3690 bp 51.92 6.06 82.28
NECEvent2014_3_1_scaffold_1666 173_005_scaffold_1666
Species: Enterobacter aerogenes (75%)
4 2586 bp 54.91 4.81 81.09
NECEvent2014_3_1_scaffold_1228 173_005_scaffold_1228
Species: Klebsiella pneumoniae (50%)
4 3907 bp 54.26 6.14 99.74
NECEvent2014_3_1_scaffold_2300 173_005_scaffold_2300
Species: Enterobacter aerogenes (50%)
4 1769 bp 44.83 4.49 82.93
NECEvent2014_3_1_scaffold_1346 173_005_scaffold_1346
Species: Klebsiella pneumoniae (50%)
4 3450 bp 44.06 7.17 86.78
NECEvent2014_3_1_scaffold_1669 173_005_scaffold_1669
Species: Klebsiella pneumoniae (66.67%)
3 2578 bp 49.34 4.95 89.37
NECEvent2014_3_1_scaffold_2967 173_005_scaffold_2967
Species: Klebsiella pneumoniae (66.67%)
3 1305 bp 48.66 4.71 100.00
NECEvent2014_3_1_scaffold_2018 173_005_scaffold_2018
Order: Enterobacteriales (100%)
3 2063 bp 44.89 5.53 99.47
NECEvent2014_3_1_scaffold_2568 173_005_scaffold_2568
Species: Enterobacter aerogenes (66.67%)
3 1556 bp 62.34 5.30 100.45
NECEvent2014_3_1_scaffold_2075 173_005_scaffold_2075
Species: Escherichia coli (66.67%)
3 2013 bp 50.87 5.29 100.45
NECEvent2014_3_1_scaffold_3132 173_005_scaffold_3132
Order: Enterobacteriales (100%)
3 1220 bp 56.39 8.11 98.36
NECEvent2014_3_1_scaffold_2675 173_005_scaffold_2675
Species: Klebsiella quasipneumoniae (50%)
2 1481 bp 60.23 4.66 98.24
NECEvent2014_3_1_scaffold_3443 173_005_scaffold_3443
Species: Enterobacter aerogenes (50%)
2 1066 bp 57.32 3.80 97.37
NECEvent2014_3_1_scaffold_2940 173_005_scaffold_2940
Species: Klebsiella pneumoniae (50%)
2 1322 bp 54.01 7.03 84.19
NECEvent2014_3_1_scaffold_3454 173_005_scaffold_3454
Species: Klebsiella pneumoniae (50%)
2 1060 bp 51.60 6.79 85.75
NECEvent2014_3_1_scaffold_2177 173_005_scaffold_2177
Species: Klebsiella pneumoniae (50%)
2 1894 bp 56.23 5.31 85.85
NECEvent2014_3_1_scaffold_3209 173_005_scaffold_3209
Species: Klebsiella variicola (50%)
2 1174 bp 61.67 5.24 91.48
NECEvent2014_3_1_scaffold_3466 173_005_scaffold_3466
Species: Klebsiella oxytoca (50%)
2 1056 bp 57.86 5.54 98.58
NECEvent2014_3_1_scaffold_2451 173_005_scaffold_2451
Species: Klebsiella pneumoniae (100%)
2 1641 bp 56.12 6.22 99.09
NECEvent2014_3_1_scaffold_3219 173_005_scaffold_3219
Species: Klebsiella pneumoniae (50%)
2 1165 bp 56.48 6.18 87.55
NECEvent2014_3_1_scaffold_2971 173_005_scaffold_2971
Species: Klebsiella pneumoniae (50%)
2 1303 bp 53.80 5.99 94.40
NECEvent2014_3_1_scaffold_2732 173_005_scaffold_2732
Species: Enterobacter aerogenes (50%)
2 1444 bp 53.12 5.61 92.24
NECEvent2014_3_1_scaffold_2477 173_005_scaffold_2477
Species: Klebsiella pneumoniae (50%)
2 1624 bp 55.42 4.43 79.25
NECEvent2014_3_1_scaffold_3503 173_005_scaffold_3503
Species: Klebsiella pneumoniae (50%)
2 1045 bp 56.94 3.88 90.72
NECEvent2014_3_1_scaffold_2743 173_005_scaffold_2743
Species: Enterobacter aerogenes (50%)
2 1438 bp 56.61 3.96 96.59
NECEvent2014_3_1_scaffold_3262 173_005_scaffold_3262
Species: Enterobacter aerogenes (50%)
2 1150 bp 56.96 5.74 82.43
NECEvent2014_3_1_scaffold_2754 173_005_scaffold_2754
Species: Enterobacter aerogenes (100%)
2 1432 bp 59.08 4.61 99.51
NECEvent2014_3_1_scaffold_2503 173_005_scaffold_2503
Species: Enterobacter aerogenes (50%)
2 1604 bp 56.11 5.99 93.33
NECEvent2014_3_1_scaffold_1738 173_005_scaffold_1738
Species: Enterobacter aerogenes (50%)
2 2453 bp 57.07 6.30 99.31
NECEvent2014_3_1_scaffold_3275 173_005_scaffold_3275
Species: Cronobacter muytjensii (50%)
2 1142 bp 50.88 6.04 74.87
NECEvent2014_3_1_scaffold_3277 173_005_scaffold_3277
Species: Klebsiella pneumoniae (50%)
2 1141 bp 56.44 6.44 99.39
NECEvent2014_3_1_scaffold_2769 173_005_scaffold_2769
Species: Klebsiella oxytoca (50%)
2 1425 bp 53.40 5.89 79.37
NECEvent2014_3_1_scaffold_2779 173_005_scaffold_2779
Species: Enterobacter aerogenes (50%)
2 1421 bp 57.57 5.91 81.91
NECEvent2014_3_1_scaffold_3562 173_005_scaffold_3562
Species: Klebsiella pneumoniae (50%)
2 1023 bp 59.92 6.16 94.13
NECEvent2014_3_1_scaffold_2540 173_005_scaffold_2540
Species: Klebsiella pneumoniae (50%)
2 1578 bp 53.61 7.32 82.32
NECEvent2014_3_1_scaffold_2286 173_005_scaffold_2286
Species: Enterobacter aerogenes (50%)
2 1784 bp 48.88 5.72 66.76
NECEvent2014_3_1_scaffold_1777 173_005_scaffold_1777
Species: Enterobacter aerogenes (100%)
2 2391 bp 55.46 5.14 90.34
NECEvent2014_3_1_scaffold_2554 173_005_scaffold_2554
Species: Enterobacter aerogenes (50%)
2 1567 bp 56.09 5.07 98.79
NECEvent2014_3_1_scaffold_3323 173_005_scaffold_3323
Species: Enterobacter aerogenes (50%)
2 1120 bp 49.38 5.09 74.20
NECEvent2014_3_1_scaffold_2044 173_005_scaffold_2044
Species: Klebsiella pneumoniae (50%)
2 2037 bp 57.68 4.42 86.75
NECEvent2014_3_1_scaffold_3071 173_005_scaffold_3071
Species: Enterobacter aerogenes (50%)
2 1248 bp 49.20 6.13 45.19
NECEvent2014_3_1_scaffold_3327 173_005_scaffold_3327
Species: Enterobacter aerogenes (50%)
2 1119 bp 53.71 5.23 68.36
NECEvent2014_3_1_scaffold_1795 173_005_scaffold_1795
Species: Raoultella ornithinolytica (50%)
2 2357 bp 60.67 6.11 97.50
NECEvent2014_3_1_scaffold_1550 173_005_scaffold_1550
Species: Klebsiella pneumoniae (50%)
2 2833 bp 60.89 4.29 100.07
NECEvent2014_3_1_scaffold_2324 173_005_scaffold_2324
Species: Enterobacter aerogenes (50%)
2 1751 bp 57.62 5.65 98.17
NECEvent2014_3_1_scaffold_3608 173_005_scaffold_3608
Species: Klebsiella pneumoniae (50%)
2 1004 bp 57.77 9.26 86.35
Displaying items 1-50 of 72 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.