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NECEvent2014_3_2_scaffold_25

Alias: 173_006_scaffold_25

Search features with annotation key words

Displaying items 61-81 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_2_scaffold_25_57
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(62056..63102)
DNA (1047bp) protein (349aa)
Lipopolysaccharide biosynthesis protein wzzE n=2 Tax=Citrobacter RepID=R8V0D8_9ENTR rbh
Lipopolysaccharide biosynthesis protein wzzE {ECO:0000313|EMBL:EOQ44955.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;"
lipopolysaccharide biosynthesis protein WzzE
NECEvent2014_3_2_scaffold_25_58
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63115..64218)
DNA (1104bp) protein (368aa)
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase n=2 Tax=Citrobacter RepID=R8UYR1_9ENTR rbh
Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase {ECO:0000313|EMBL:EOQ44954.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase
NECEvent2014_3_2_scaffold_25_59
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64458..65717)
DNA (1260bp) protein (420aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=545 species="
Transcription termination factor Rho n=16 Tax=Enterobacteriaceae RepID=A8ACT5_CITK8 rbh
rho; transcription termination factor Rho
NECEvent2014_3_2_scaffold_25_60
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66055..66384)
DNA (330bp) protein (110aa)
Thioredoxin n=7 Tax=Escherichia coli RepID=D7XDE5_ECOLX
Thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=868136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC1D.;
NECEvent2014_3_2_scaffold_25_61
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66528..67796
DNA (1269bp) protein (423aa)
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011808};; TaxID=766154 species="B
ATP-dependent RNA helicase RhlB n=5 Tax=Enterobacteriaceae RepID=C1MG37_9ENTR rbh
ATP-dependent RNA helicase RhlB
NECEvent2014_3_2_scaffold_25_62
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

67805..69289
DNA (1485bp) protein (495aa)
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01550, ECO:0000256|SAAS:SAAS00181013}; EC=3.6.1.40 {ECO:0000256|HAMAP-Rule:MF_01550, ECO:0000256|SAAS:SAAS00181014};
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase n=1 Tax=Citrobacter sp. KTE32 RepID=R8V0D4_9ENTR rbh
guanosine pentaphosphate phosphohydrolase
NECEvent2014_3_2_scaffold_25_63
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69337..71358)
DNA (2022bp) protein (674aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=1439318 species="Bacteria; Proteobacteria; Gammap
ATP-dependent DNA helicase rep n=1 Tax=Citrobacter sp. KTE32 RepID=R8UYQ7_9ENTR rbh
ATP-dependent DNA helicase Rep
NECEvent2014_3_2_scaffold_25_64
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71504..71785
DNA (282bp) protein (94aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enteroba
Peptidyl-prolyl cis-trans isomerase C n=2 Tax=Citrobacter RepID=R8UZD5_9ENTR
peptidylprolyl isomerase
NECEvent2014_3_2_scaffold_25_65
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71839..73314)
DNA (1476bp) protein (492aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00185580}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase n=1 Tax=Citrobacter sp. KTE32 RepID=R8UZL3_9ENTR rbh
NECEvent2014_3_2_scaffold_25_66
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73467..74369
DNA (903bp) protein (301aa)
HTH-type transcriptional activator ilvY n=2 Tax=Citrobacter RepID=R8V401_9ENTR rbh
Transcriptional regulator {ECO:0000313|EMBL:KKC64692.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter a
transcriptional regulator rbh
NECEvent2014_3_2_scaffold_25_67
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

74545..75738
DNA (1194bp) protein (398aa)
Putative reductase WG82_05290 {ECO:0000256|HAMAP-Rule:MF_01838}; EC=1.3.1.- {ECO:0000256|HAMAP-Rule:MF_01838};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; E
trans-2-enoyl-CoA reductase (EC:1.3.1.-)
Putative reductase WC7_04603 n=1 Tax=Citrobacter sp. KTE151 RepID=R8WJ91_9ENTR rbh
NECEvent2014_3_2_scaffold_25_68
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75802..77346)
DNA (1545bp) protein (515aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=35703 species="Bacteria; Proteobacteri
ilvA; threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase biosynthetic n=1 Tax=Citrobacter sp. KTE151 RepID=R8WJU9_9ENTR rbh
NECEvent2014_3_2_scaffold_25_69
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77352..79202)
DNA (1851bp) protein (617aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=35703 species="Bacteria; Proteobacteria
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Citrobacter sp. KTE32 RepID=R8UZD1_9ENTR rbh
NECEvent2014_3_2_scaffold_25_70
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79359..80288)
DNA (930bp) protein (310aa)
Branched-chain-amino-acid aminotransferase n=4 Tax=Citrobacter RepID=C1MG28_9ENTR rbh
branched-chain amino acid aminotransferase
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:GAL47418.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citr
NECEvent2014_3_2_scaffold_25_71
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80306..80569)
DNA (264bp) protein (88aa)
ilvM; acetolactate synthase 2 regulatory subunit (EC:2.2.1.6)
Acetolactate synthase isozyme 2 small subunit n=10 Tax=Citrobacter RepID=C1MG27_9ENTR
Acetolactate synthase isozyme 2 small subunit {ECO:0000313|EMBL:KDF03632.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; C
NECEvent2014_3_2_scaffold_25_72
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(80566..82212)
DNA (1647bp) protein (549aa)
Acetolactate synthase catalytic subunit {ECO:0000313|EMBL:KKC64687.1}; EC=2.2.1.6 {ECO:0000313|EMBL:KKC64687.1};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
acetolactate synthase catalytic subunit (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Citrobacter sp. KTE32 RepID=R8V0C6_9ENTR rbh
NECEvent2014_3_2_scaffold_25_73
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

82804..84324
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Citrobacter freundii RepID=UPI0002E8983C rbh
ATP-dependent protease {ECO:0000313|EMBL:KKC64686.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amal
ATP-dependent protease
NECEvent2014_3_2_scaffold_25_74
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(84350..84688)
DNA (339bp) protein (113aa)
UPF0438 protein yifE n=12 Tax=Enterobacteriaceae RepID=C1MG23_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY10712.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
NECEvent2014_3_2_scaffold_25_75
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

84807..85640
DNA (834bp) protein (278aa)
HTH-type transcriptional regulator hdfR n=1 Tax=Citrobacter sp. KTE151 RepID=R8WPA8_9ENTR rbh
HTH-type transcriptional regulator hdfR {ECO:0000313|EMBL:EOQ44937.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" sourc
transcriptional regulator HdfR
NECEvent2014_3_2_scaffold_25_trna_2
unknown

Not on your lists

comp(85743..85815)
DNA (73bp)
transferRNA
NECEvent2014_3_2_scaffold_25_trna_1
unknown

Not on your lists

comp(85871..85944)
DNA (74bp)
transferRNA
Displaying items 61-81 of 81 in total

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