ggKbase home page

NECEvent2014_3_2_scaffold_14_5

Organism: NECEvent2014_3_2_Citrobacter_KTE32-rel_52_483

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 3
Location: comp(3077..3610)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Citrobacter freundii RepID=UPI0003124168 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 177.0
  • Bit_score: 338
  • Evalue 4.60e-90
  • rbh
Type VI secretion lipoprotein {ECO:0000313|EMBL:KDF13392.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freun similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 177.0
  • Bit_score: 307
  • Evalue 1.60e-80
type VI secretion protein similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 178.0
  • Bit_score: 225
  • Evalue 1.60e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 534
ATGAGACTGGCGATTATCGCTATTAATTTTGCCGTAATAACCGTAATGACCAGTGTGGTCACTGGATGTGGTCTGACACAAAAAGTATCTGAAGGCACGGTGTCATTAACGAAGTCTATTTTTTATAAGGAAATTAAAACGCTGCATTTGGATCTTTCCGCCAGAGAAGGCGCTAATAAAAATGCGCAGGGCATAGCGCTTTCTACGGTTGTGCGTATTTACCAACTCAAAGATCGTAAAGCGTTTGATTCGGCTAATTATCAGTCTTTATTTGAGCAAGATAGCACGGTGGTGAAAACAGATTTACTGGCTCAGAAAGATGTTTTGATACGTCCTGGTGAAAGTGTAACTGTCGATATTCCACTCGAAAAGGAAGCGCAATATGTTGCCGTAGCGGGGATGTTTATTTCTCCCGAACAGTCTGAAGATTCATGGCGCGTGGTATTACGCCGTGAAGATCTCGATCCTGATAAGGCGCGTGTGCTTGAATTAAATACCCGGACTCTGGCACTCCTGGCGCAGGAGGATGAGTAA
PROTEIN sequence
Length: 178
MRLAIIAINFAVITVMTSVVTGCGLTQKVSEGTVSLTKSIFYKEIKTLHLDLSAREGANKNAQGIALSTVVRIYQLKDRKAFDSANYQSLFEQDSTVVKTDLLAQKDVLIRPGESVTVDIPLEKEAQYVAVAGMFISPEQSEDSWRVVLRREDLDPDKARVLELNTRTLALLAQEDE*