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NECEvent2014_3_2_scaffold_14_15

Organism: NECEvent2014_3_2_Citrobacter_KTE32-rel_52_483

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 3
Location: comp(16740..19274)

Top 3 Functional Annotations

Value Algorithm Source
type IV secretion protein Rhs n=1 Tax=Citrobacter freundii RepID=UPI000300E30C similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 778.0
  • Bit_score: 1284
  • Evalue 0.0
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KDF12553.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 844.0
  • Bit_score: 1282
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 843.0
  • Bit_score: 1136
  • Evalue 0.0

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2535
ATGGGAATGTCCGAATCACTGGGTGGTGGGATGTCATTTATATCTGAAAATACGTTAAACCGTTATCAATTGTATATCCCTTCATGCAAGTCTGTACTGGATGTTATTAATTTTAGTGGTACGGAGGAAATGAGTTCGCTGTATCGATATGTAGTTCATTTTTCCAGCAATGATAAAGACATTGCAGCAGAGTCGATACTTAGAAAATCGACTACATTGACCATGGGAATAGGGAGGTTAAGTGAGTTAACTGCCCGAAAAGTGGTACATGGTATTGTGACATCTTTCCATCGTATAAGTGGTTCAAAAGACCAGGCAACCTATCAGTTAATCATTGAACCTTTTGTCGCGTTGTTGAAAAATCAATTTCGCACGCACCGTTTTTTTATAAATATGTCAGTTCCGGACGTTGTTAGTCAAATTTTACAGGAGCATGGTTTAAAAGACTGGGAATATAATTTTGATTTGGCAATGGAATATCCAAAACGAGAGCAAATTAATCAGTATCACGAAAGCGATCTGGTTTTTATTGAACGTTTGCTCTCTGAAGTGGGAATATTCTTCTTCTTCAGGCTTCAGCCTGATGCTGGTACTGAAGTGATCTATTTTGCTGATAAACAAAGCGCATGGAAGTTTGGCAAAACATTACCGCTGAATAGTCCCTCCGGAATGAATGACAATGGTATCGACTCAGTCTGGGATATTCAGTTCCACCAGTCTGCGGTGCAGGCATCGGTTACTGCTGGGGACTATAACCATCGTCAGGCACAGAAAATATTATTTTCTGCACAAGCCGATATGACTTACGGTGACGGTGACGGGGTGACTTACGGGGATGTTTACCACTATCGCCCGCGCCATCTTGAAACGGGTGATAAGGTATCTCCATCGCCTGAGACAGGGAATTTTTGGGCTCGTCTGGAACATGAGCGTTATCTCTCCTCACAAGCCACAATCACTGGATTATCAACCGATGTAAGCCTCAGCCCGGCTCAGGTCCTGAATATTACGGAATCCACACCTGTCCCAACGCTTCCTGCCAGTGTGTGTAACAGCTTGCTGGTTACGGCGGTTTCATTCAGCGCAAGCCGAAAGGAAGCACTACAAGTGGTGTTGATGGCGACCGTTTACAGTGAAACGCGCTGTTGGAGACCTCCACTAAAACCGCGGCCAGTGATTAGCGGCACGCTAATGGCACGTGTTTCAAGCCCGAAAAAGAATGATGAATATGCTCATTTGAATCAGAGCGGGCTTTATTGGGTTAAGTTTGATGCGGATCGTGATGATAAACAACAGGGCTACGAAAGTATGCCAGTACGCCTTGCCAAACCTTATGGCGGCGACACCTACGGTATTCACTTCCCGCTGATACAGGGTACAGAAGTGGCGGTGGCGTTCCATGAAGGGGATCCGGACCGGCCCTACATCGCCCATGCGCTGCATGACTCCCGACATCCTGACCACGTGACGGAGGCAAACCACACCCGTAACGTCATCCGCACGCCCGCCAATAACAAACTGCGCATGGAGGACAAACGGGGCGAGGAGCACATCAAGCTCAGCACTGAGTACGGCGGGAAGACGCAGCTGAACCTGGGGCATAACGTGGATGCGCAGCGCGCGCTGCGGGGAGAGGGCGCGGAGCTTCGCACCGACGACTGGGTGGCGGTACGCGGCGGTAAAGGGGTTCTGATAACGGCAGAGATGCAGGCGGAAGCCGTGGACCGGATGCTGGAGATGGACGGTGTGATACGTCAACTGGAGCAGGCGTTGTCGCTGGCAAGGAGCCTGCAGAGGTCAGCGGAGACGGCAAAGGCAACTGCAGGAGACACAGCGAGCCAGCAGGCGCTGAATGATGCACTGGAGGAACTGGCTCAGCCGGGTCTTATTCTGCATGCGCCTGCGGGCGTAGGGATGATGAGTGCGAAGGCCGTGCGGGTGTCGTCTGGAACGGACAGCGTGGGAATAATGTCGGGGCACAATACAGACATCAGTACCGGCAGGTCGTTTACGGTAGCGGCGAGCGATACGGTGAGTCTGTACGCACAGGAACAGGGAATGCAGCTGTATGCGGCAAAGGGAAAAGTGGATATTCAGGCCCAGGACGATGAAATGGGTGTGACGGCGAAGAACGATATTACGGTAAGCAGCACAGAGGGGAAAATCACCGTGAATGCGAGCGAGGAGCTATTGCTGAGCTGTGGCGGGGCGTATATCCGGCTGAAAGGGGGATCAATTGAACTGGGATGCCCGAAGAATATCCTGCTGAAGTCGCTGAATGTGCAGAAATTGGGAGCTACAAGTCTGAATATGCCAGTAGAGGAGTTGCCGCGAGGTTATAAAGGTGGGTTCACTATCACCAGTGAAAAGACCGGAGAAATAATGCCTTATGTTAGTTATCGACTGACGACTTCTGAAGGTGATGTATATGACGGGATTTCAGATGAGAATGGTCAGACGATACCGGTATACACAGCAATACCCTCCTCTGTAAAAATTGAATTTCCGGACAGTAAAACCAGCGATAAGGAATGA
PROTEIN sequence
Length: 845
MGMSESLGGGMSFISENTLNRYQLYIPSCKSVLDVINFSGTEEMSSLYRYVVHFSSNDKDIAAESILRKSTTLTMGIGRLSELTARKVVHGIVTSFHRISGSKDQATYQLIIEPFVALLKNQFRTHRFFINMSVPDVVSQILQEHGLKDWEYNFDLAMEYPKREQINQYHESDLVFIERLLSEVGIFFFFRLQPDAGTEVIYFADKQSAWKFGKTLPLNSPSGMNDNGIDSVWDIQFHQSAVQASVTAGDYNHRQAQKILFSAQADMTYGDGDGVTYGDVYHYRPRHLETGDKVSPSPETGNFWARLEHERYLSSQATITGLSTDVSLSPAQVLNITESTPVPTLPASVCNSLLVTAVSFSASRKEALQVVLMATVYSETRCWRPPLKPRPVISGTLMARVSSPKKNDEYAHLNQSGLYWVKFDADRDDKQQGYESMPVRLAKPYGGDTYGIHFPLIQGTEVAVAFHEGDPDRPYIAHALHDSRHPDHVTEANHTRNVIRTPANNKLRMEDKRGEEHIKLSTEYGGKTQLNLGHNVDAQRALRGEGAELRTDDWVAVRGGKGVLITAEMQAEAVDRMLEMDGVIRQLEQALSLARSLQRSAETAKATAGDTASQQALNDALEELAQPGLILHAPAGVGMMSAKAVRVSSGTDSVGIMSGHNTDISTGRSFTVAASDTVSLYAQEQGMQLYAAKGKVDIQAQDDEMGVTAKNDITVSSTEGKITVNASEELLLSCGGAYIRLKGGSIELGCPKNILLKSLNVQKLGATSLNMPVEELPRGYKGGFTITSEKTGEIMPYVSYRLTTSEGDVYDGISDENGQTIPVYTAIPSSVKIEFPDSKTSDKE*