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NECEvent2014_3_2_scaffold_14_22

Organism: NECEvent2014_3_2_Citrobacter_KTE32-rel_52_483

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 3
Location: comp(24442..24933)

Top 3 Functional Annotations

Value Algorithm Source
Hcp1 family type VI secretion system effector n=5 Tax=Citrobacter RepID=G9SCM2_CITFR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 340
  • Evalue 8.50e-91
  • rbh
Hcp family T6SS protein CtsH1 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 340
  • Evalue 2.40e-91
  • rbh
Hcp family T6SS protein CtsH1 {ECO:0000313|EMBL:AHY10362.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freun similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 340
  • Evalue 1.20e-90

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGGCAATTCCAGTCTACCTTTGGCTGAAAGACGACGGCGGTGCGGATATTAAGGGCTCTGTTGATGTGAAAGACCGTGTGGGCAGTATCGAAGTAGTGGCTCAGGAACATAACCTGTACATCCCTACCGATAACAACACCGGTAAGTTGACCGGGACGCGCATCCATACCCCGTTTCTTTTCACTAAGGAAATCGATGCTTCCAGCCCGTATCTGTACAAGGCTGTAACCACTGGTCAGACCCTGCGTCAGGCAGAGTTCAAATGGTATCGCATCAATGATGCAGGTCAGGAAGTGGAATACTTCAACACCACTCTGCACAACGTGAAAGTGGTGAAAGTAAATCCTGTGATGTACGACATCAAAGATCCGGCTAAAGAGAAGCATAACCACCTGGAACAGATTGAACTGCGCTACGAGAAGATCGTCTGGACGTATAAGGATGGCAACATTATCCATTCTGACGCCTGGAACGAGCGTACCACCGCATAA
PROTEIN sequence
Length: 164
MAIPVYLWLKDDGGADIKGSVDVKDRVGSIEVVAQEHNLYIPTDNNTGKLTGTRIHTPFLFTKEIDASSPYLYKAVTTGQTLRQAEFKWYRINDAGQEVEYFNTTLHNVKVVKVNPVMYDIKDPAKEKHNHLEQIELRYEKIVWTYKDGNIIHSDAWNERTTA*