ggKbase home page

NECEvent2014_3_2_scaffold_4_26

Organism: NECEvent2014_3_2_Veillonella_parvula-rel_39_272

near complete RP 51 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(37262..38683)

Top 3 Functional Annotations

Value Algorithm Source
Histone deacetylase family n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YN34_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 474.0
  • Bit_score: 955
  • Evalue 2.70e-275
  • rbh
Histone deacetylase family {ECO:0000313|EMBL:EFB86203.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 474.0
  • Bit_score: 955
  • Evalue 3.90e-275
histone deacetylase superfamily protein similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 474.0
  • Bit_score: 914
  • Evalue 1.20e-263

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1422
ATGTGGAATAAAGGTTTATCCTATCGTGAGCGTCATGGACTTATAGAAAAGGATATAAACACGAAACTGAATGACGACGTGAATCCTACTATTGATAAAGCTAAATATCATCACAGTTTAGGTCTTGTCTTTTTCCCTGCGTTTGACTGGAAAATTTCTGAAACACATCCTGAACGACAAGAGCGTTTACTCTATACGCGAGATCAAATTGTAGAGGAAGGTTTGTTAGATATACCGAATATTAGAGAATATAATCCAATAGTAGCTGATTGGGATACAATAGAGCGGGTTCATGTTGGTGCTCCAGATTTAGAGTCTTGGGTGACTGAAGCTCATCGAGTATCTGCTGGAGGTGCTATTGCGGCAGCTGATGCGGTCATGTGCGGTGAAGTAGATCGCGCCTTTGCATTGGTAAGACCACCAGGTCACCATGCGATGGCTATGGTTCATGGTATTCGTGGCTTCTGTACGATTAATATTGAAGCCGTTATGATTCAACACATACGTCAAACCTATGGAATCAAACGCGTTGCCGTAGTAGATACCGATGTACATCACGGTGATGGTTCTCAAGATGTGTTTTACCATGATCCTGATACGTTGTATATTAGCTTCCATCAAGATGGACGTACTTTATATCCTGGCACAGGCTTTATGGATGAATTTGGTGGACCTCAGGCCATCGGTGGTAACATCGATATTCCACTACCGCCTGGTACGGGTGACGAAGGCTTGATGAAGGTCATGCGTGAGCTTGTATTGCCTATCCTTGAAGATTTTGATCCAGATATTGTCATTAACTCGGCAGGACAAGATAATCACTTTAGTGATCCGTTGGCTAATATGCAGGTAACTGCAAAGGGCTATGCAGAGCTAGTCGATTTATTACAAGCAGATATAGCAGTCTTAGAAGGAGGCTATTCCGTACAGGAAGCATTGCCATATGTGAATACAGGTATCATTTTATCCATGGCAGGCCTTGATTACAGCAAGGTCGTAGAACCTGCCTTTGACCCTGTTAAATATAAACAAAGTCAAAGTGTAACAAATTATATAGATGAGCTTATCGCTAAGTGGAAAGTACAATGGACTAATCGATATCGTATAGCAGAAGAACGTGCTGGTGTAGGTGATATTTGGTCAAATCGTTACAATGTGTATTACGATGAAACGGGCGTACAAGAGGAGCGCCTTGAAAGGGTGCGTATGTACGAAGACAAGGTAGGCTGGCATAGTGTACTTTCACGAGGACAATATGGACCGTATGGACCGCAAAGCGTATATGCTATGTTCATCCCTTGGCAAGCAGATAAAGGGACGCGTCAAGATGCTATCGCAGAAGCAAAACGAGCTAAAGCAGAAGGGGGAGCTAGCCGTTACGTTGTGGTAGATCCACTTGGTGACGGACAATATGAACTATAA
PROTEIN sequence
Length: 474
MWNKGLSYRERHGLIEKDINTKLNDDVNPTIDKAKYHHSLGLVFFPAFDWKISETHPERQERLLYTRDQIVEEGLLDIPNIREYNPIVADWDTIERVHVGAPDLESWVTEAHRVSAGGAIAAADAVMCGEVDRAFALVRPPGHHAMAMVHGIRGFCTINIEAVMIQHIRQTYGIKRVAVVDTDVHHGDGSQDVFYHDPDTLYISFHQDGRTLYPGTGFMDEFGGPQAIGGNIDIPLPPGTGDEGLMKVMRELVLPILEDFDPDIVINSAGQDNHFSDPLANMQVTAKGYAELVDLLQADIAVLEGGYSVQEALPYVNTGIILSMAGLDYSKVVEPAFDPVKYKQSQSVTNYIDELIAKWKVQWTNRYRIAEERAGVGDIWSNRYNVYYDETGVQEERLERVRMYEDKVGWHSVLSRGQYGPYGPQSVYAMFIPWQADKGTRQDAIAEAKRAKAEGGASRYVVVDPLGDGQYEL*