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NECEvent2014_3_2_scaffold_148_2

Organism: NECEvent2014_3_2_Clostridium_ultunense-rel_32_9_partial

near complete RP 42 / 55 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 4
Location: 893..1381

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T8J4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 162.0
  • Bit_score: 208
  • Evalue 5.00e-51
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EGD49792.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clo similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 162.0
  • Bit_score: 207
  • Evalue 2.00e-50
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 156.0
  • Bit_score: 206
  • Evalue 7.00e-51

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Taxonomy

[Clostridium] papyrosolvens → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 489
GTGTCGATAAAACCACTATGCATAGATGAAAGCATAGATAATATTGTAAATACCTATTCAAATATGGTTTATAGGTTAGCATTTTCACAGACCCGAAATAAAAGCGATGCCGATGATATCTTCCAAGAAGTATTTTTGCGATATATAAAGAATAAACCAAATTTTGAAACAGAAGAACATCGAAAAGCATGGCTTATAAGGGTTACTATTAATTGTGCAAAAAAACTGTGGGCATCGTCTTGGGCAAAGAAAACTCAACCTTTAGATGATGAAATTGCTTTTGAAACTGAAGAGGATAATAATTTACATTATGAACTTAAAAAATTACCTATTAAGTATAGAACCGTTATTCACTTATTTTATTACGAGGATTTAAGTATAGAAGAAATCAGTCATATATTAAAGCAAAAACCATCTACAGTTAGAACTCAATTAACTCGTGGGAGACGTAAGCTAAAAGAAATATTAAAGGAGGACTATGATGTTTAA
PROTEIN sequence
Length: 163
VSIKPLCIDESIDNIVNTYSNMVYRLAFSQTRNKSDADDIFQEVFLRYIKNKPNFETEEHRKAWLIRVTINCAKKLWASSWAKKTQPLDDEIAFETEEDNNLHYELKKLPIKYRTVIHLFYYEDLSIEEISHILKQKPSTVRTQLTRGRRKLKEILKEDYDV*