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NECEvent2014_3_2_scaffold_558_1

Organism: NECEvent2014_3_2_Clostridium_ultunense-rel_32_9_partial

near complete RP 42 / 55 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 4
Location: comp(3..419)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=A6LVT3_CLOB8 similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 139.0
  • Bit_score: 260
  • Evalue 1.20e-66
Uncharacterized protein {ECO:0000313|EMBL:KJZ82849.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 139.0
  • Bit_score: 284
  • Evalue 6.60e-74
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 89.2
  • Coverage: 139.0
  • Bit_score: 260
  • Evalue 3.50e-67

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Taxonomy

Clostridium sp. IBUN22A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 417
ATGGATTTTAATTATATTGAAGCTTTAGTTACCAAATGTAAAAATAATGATGAAGACGCAAAAGAAAAATTATCTGAAGAATTTAGGCCATTAATTTATAATATTTCTAAAAGAACTTTCATTGATGGATACAATGCCCATGATATTATTCAGGAATGTTACCAATCTCTTTTTAAATCTGTTTCCATGTACAATTTAGAAAAGCATAGATTCGTTGCCTATGCTACCAATGCTATTAAAAATAATATGAATGATTTAATTAAAAGAATTAAAACCAGAAGGTCTACTGAAGGTAATGATGCATTAAGCTTACATGATGATGTTGAAAATGATTTTCCTGAACTTGAAATCTCAACTGAAACTTCATTATGTAAAATGTGTGACTATGAAGATTTAAAATTAGCCCTTAAGAATTTA
PROTEIN sequence
Length: 139
MDFNYIEALVTKCKNNDEDAKEKLSEEFRPLIYNISKRTFIDGYNAHDIIQECYQSLFKSVSMYNLEKHRFVAYATNAIKNNMNDLIKRIKTRRSTEGNDALSLHDDVENDFPELEISTETSLCKMCDYEDLKLALKNL