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NECEvent2014_3_3_scaffold_3111_1

Organism: NECEvent2014_3_3_UNK

partial RP 1 / 55 BSCG 1 / 51 ASCG 3 / 38 MC: 2
Location: comp(1..1722)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1000570 species="Bacteria; F similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 574.0
  • Bit_score: 1126
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Streptococcus anginosus SK52 = DSM 20563 RepID=U2XWP6_STRAP similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 574.0
  • Bit_score: 1126
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 574.0
  • Bit_score: 1122
  • Evalue 0.0

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Taxonomy

Streptococcus anginosus → Streptococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1722
GGACTGGGAAATTTAAAATTTGATTCTCTTTATCAGTTCAATCAGTATCCTATGCAGGAATTTTTTAGTCAATTTCAGCTTTTGAAAGAAGAAATCAGTCGCTATAAAAAATCTAACTACACAGTTATTATACAATCAAATTCTTTATTGACTTTACAAAGTTTACATAAAAGTTTACAAGAATATGAAATTCCACTTGATTATGTTAATGATACTAAAATTCATAAACATGCTGTTCAATTAGTAGAAGGACGTTTAATTCAAGGATTTAATTTTGTAGACGAAAAAATTGTTTTAATCACTGAATATGATATTCTGCAAAAAAAAGTAAAACGAAAAGTTCGCAGGCAAAGTATTTCTAATGCTGAACGTTTGAAAAATTATAATGAGCTGGAAAAAGGAGATTATGTTGTTCATAACGTTCATGGAATTGGGCGATATTTAGGAATTGAGACGATTGAAATTTCAGGAATTCATCGTGATTATCTCACTATTCAATATCAAAATGCAGATCGTATTTCTATTCCTGTTGATCAGATTCATCTACTTTCTAAATATGTTGCGAGTGATGGTAAAGCGCCTAAGATCAATAAATTAAATGATGGACGTTTTCAAAAAACTAAACAGAGAGTACAACATCAAGTTGAAGACATTGCTGAGGATTTAATTAAACTTTACGCAGAGAGAAGTCAATTAAAGGGATTTGCGTTTTCTAGTGATGATTCTTATCAGCAAGAATTTGATAATGATTTTCCTTATGTAGAAACAGAAGATCAGTTGCGTTCTATAAAAGAAGTTAAAAAAGACATGGAAAGTGATCATCCTATGGACCGTCTTTTAGTTGGGGATGTTGGTTTTGGGAAGACGGAAGTAGCTATGAGAGCTGCTTTTAAAGCAGTAAATGATCATAAACAAGTGGTAATTTTAGTTCCCACTACGGTTTTAGCTCAACAGCACTATACGAACTTTAAGGACCGTTTTAACGATTTTCCTATCAACATTGAAGTATTAAGTCGTTTTAAAAGTAAATCAGAACAAAAAATAATTTTAGAAAAATTAAAAAAAGGGCAAGTGGATATTATTATTGGAACGCATCGTCTCCTGTCAAAAGATATTGTATTTGCTGATTTAGGACTCATTGTTATTGATGAGGAGCAACGTTTTGGAGTTAAGCATAAAGAAAAATTAAAAGAGTTGAAAACAAAAGTTGATGTTTTAACTTTGACGGCGACCCCTATTCCTCGTACACTCCATATGTCTATGTTAGGTATACGTGATTTATCAGTTATTGAAACTCCTCCAACAAATCGCTACCCAGTTCAAACTTATGTTTTAGAAAATAATGCAACAGTTATTCGAGATGCAGTTTTAAGAGAAATGGATCGAGGGGGGCAGGTTTACTATCTTTACAATAAAGTTGACACAATGGAGCGAAAAGTTTCAGAATTGAAAGAATTGATTCCAGAAGCTTCTATTGGATATGTACATGGTCAAATGAGTGAAATTCTTCTTGAAAATACTTTACTTGATTTTATCAATGGGGAATATGATATTTTGGTGACAACGACTATTATTGAAACTGGTGTTGATATTCCTAATGTTAATACTCTTTTTATTGAAAATGCAGATTACATGGGATTGTCAACTTTATATCAATTAAGAGGGCGTATTGGTCGTAGTAATCGTATTGCTTATGCCTATCTCATGTATCGCCCAGAAAAA
PROTEIN sequence
Length: 574
GLGNLKFDSLYQFNQYPMQEFFSQFQLLKEEISRYKKSNYTVIIQSNSLLTLQSLHKSLQEYEIPLDYVNDTKIHKHAVQLVEGRLIQGFNFVDEKIVLITEYDILQKKVKRKVRRQSISNAERLKNYNELEKGDYVVHNVHGIGRYLGIETIEISGIHRDYLTIQYQNADRISIPVDQIHLLSKYVASDGKAPKINKLNDGRFQKTKQRVQHQVEDIAEDLIKLYAERSQLKGFAFSSDDSYQQEFDNDFPYVETEDQLRSIKEVKKDMESDHPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVVILVPTTVLAQQHYTNFKDRFNDFPINIEVLSRFKSKSEQKIILEKLKKGQVDIIIGTHRLLSKDIVFADLGLIVIDEEQRFGVKHKEKLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLENNATVIRDAVLREMDRGGQVYYLYNKVDTMERKVSELKELIPEASIGYVHGQMSEILLENTLLDFINGEYDILVTTTIIETGVDIPNVNTLFIENADYMGLSTLYQLRGRIGRSNRIAYAYLMYRPEK