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NECEvent2014_3_3_scaffold_199

Alias: 173_001_scaffold_199

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Displaying items 31-47 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_199_31
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31611..32555)
DNA (945bp) protein (315aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s
tRNA pseudouridine synthase B n=1 Tax=Citrobacter freundii RepID=UPI00031F797A rbh
truB; tRNA pseudouridine synthase B
NECEvent2014_3_3_scaffold_199_32
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32555..32959)
DNA (405bp) protein (135aa)
Ribosome-binding factor A n=20 Tax=Enterobacteriaceae RepID=D5CCB1_ENTCC
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_3_3_scaffold_199_33
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33180..35870)
DNA (2691bp) protein (897aa)
Translation initiation factor IF-2 n=2 Tax=Citrobacter RepID=R8V473_9ENTR rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
infB; translation initiation factor IF-2
NECEvent2014_3_3_scaffold_199_34
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35895..37382)
DNA (1488bp) protein (496aa)
Transcription elongation protein nusA n=10 Tax=Citrobacter RepID=C1M9X2_9ENTR rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; C
nusA; transcription elongation factor NusA
NECEvent2014_3_3_scaffold_199_35
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37411..37863)
DNA (453bp) protein (151aa)
Ribosome maturation factor RimP n=12 Tax=Enterobacteriaceae RepID=C1M9X3_9ENTR
ribosome maturation protein RimP
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
NECEvent2014_3_3_scaffold_199_36
Klebsiella variicola, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(38060..38362)
DNA (303bp) protein (101aa)
ATPase n=1 Tax=Escherichia coli RepID=U5QR95_ECOLX
Genome assembly 8917 {ECO:0000313|EMBL:CEP32922.1}; TaxID=244366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella variico
NECEvent2014_3_3_scaffold_199_trna_2
unknown

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comp(38074..38147)
DNA (74bp)
transferRNA
NECEvent2014_3_3_scaffold_199_37
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38482..39825
DNA (1344bp) protein (448aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009500}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00581, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase
Argininosuccinate synthase n=7 Tax=Citrobacter RepID=J0M8F6_9ENTR rbh
argininosuccinate synthase
NECEvent2014_3_3_scaffold_199_trna_1
unknown

Not on your lists

comp(40033..40116)
DNA (84bp)
transferRNA
NECEvent2014_3_3_scaffold_199_38
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40095..40379)
DNA (285bp) protein (95aa)
Preprotein translocase, SecG subunit n=1 Tax=Citrobacter youngae ATCC 29220 RepID=D4BKB1_9ENTR
secG; preprotein translocase subunit SecG
Preprotein translocase subunit SecG {ECO:0000313|EMBL:KKC63286.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Cit
NECEvent2014_3_3_scaffold_199_39
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40547..41440)
DNA (894bp) protein (298aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8V479_9ENTR rbh
Transcriptional regulator {ECO:0000313|EMBL:KKC63287.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter a
LysR family transcriptional regulator
NECEvent2014_3_3_scaffold_199_40
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41589..42722
DNA (1134bp) protein (378aa)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
Isoaspartyl dipeptidase n=1 Tax=Citrobacter sp. KTE151 RepID=R8WM71_9ENTR rbh
isoaspartyl dipeptidase
NECEvent2014_3_3_scaffold_199_41
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42733..44199
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V3F0_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:EOQ45991.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter s
dcuD; C4-dicarboxylate transporter
NECEvent2014_3_3_scaffold_199_42
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(44245..45582)
DNA (1338bp) protein (446aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1169322 species="Bacter
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Citrobacter sp. KTE151 RepID=R8WSB8_9ENTR rbh
NECEvent2014_3_3_scaffold_199_43
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45575..46423)
DNA (849bp) protein (283aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|Rule
folP; dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Citrobacter sp. KTE151 RepID=R8WMA7_9ENTR rbh
NECEvent2014_3_3_scaffold_199_44
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46522..48465)
DNA (1944bp) protein (648aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterob
ATP-dependent zinc metalloprotease FtsH n=3 Tax=Citrobacter RepID=R8V485_9ENTR rbh
hflB; ATP-dependent metalloprotease
NECEvent2014_3_3_scaffold_199_45
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48556..48651)
DNA (96bp) protein (32aa)
Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC:2.1.1.-)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042948}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547, ECO:0000256|SAAS:SAAS00042802};; 23S rR
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Escherichia coli BCE019_MS-13 RepID=M8S9H6_ECOLX
Displaying items 31-47 of 47 in total

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