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NECEvent2014_3_3_scaffold_29_18

Organism: NECEvent2014_3_3_Klebsiella_oxytoca_55_54_partial

partial RP 30 / 55 MC: 4 BSCG 25 / 51 ASCG 11 / 38 MC: 3
Location: comp(17673..18803)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055322}; EC=2.1.1.189 {ECO:0000256|HAMAP-Rule:MF_01012, ECO:0000256|SAAS:SAAS00055340};; 23S similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 376.0
  • Bit_score: 760
  • Evalue 1.10e-216
23S rRNA (uracil(747)-C(5))-methyltransferase RlmC n=2 Tax=Klebsiella oxytoca RepID=V3LNW1_KLEOX similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 376.0
  • Bit_score: 762
  • Evalue 2.70e-217
  • rbh
rumB; 23S rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 376.0
  • Bit_score: 730
  • Evalue 2.50e-208

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1131
ATGCACTGCGCACTCTATGACGCGGGCCGCTGTCGCTCCTGCCAGTGGCTGGAACTGCCGGTATCGCAACAGCTCGCCGATAAAATGGCCGATTTGCGCACGCTTCTCGCCGATGCGCCCGTCGCTGAATGGTGCGCACCGGTTTGCGGCCCGGAAAGCGGGTTTCGCAACAAAGCGAAAATGGTGGTCAGCGGTAGCGTAGAGCGCCCGCTGCTCGGAATGCTGCACCGTGATGGCGCCCCGGAAGACCTCACCGATTGCCCGCTCTATCCGCCAGGCTTCGCCCCCGTCTTCGCTGCGCTCAAGCCGTTTATCGCCCGCGCCGGACTCACGCCCTATAACGTTGCCCGCAGGCGCGGAGAGCTGAAGTACATTCTGCTGACCGAAAGCCGGCTCGACGGCGGGATGATGCTGCGCTTTGTTCTGCGTTCGGAGACCAAGCTGGCCCAGCTGCGCGCCGCGCTGCCGGCGCTCCAGGCGCAGCTGCCGCAGCTGAAAGTGATTACCGCCAATATTCAGCCGGTGCATATGGCCATCATGGAAGGAGAGCGGGAAATTTTCCTCACCGACCAGCAGGCGCTGGCGGAAAACTTTAACGGCGTGCCGCTATGGATCCGCCCGCAAAGCTTCTTTCAGACCAACCCGGCGGTGGCCAGCCGGCTGTATGCCACCGCTCGCGACTGGGTGCGCCAGCTACCGGTTAAGCATATGTGGGATCTCTTTTGCGGCGTTGGCGGCTTTGGTCTGCACTGCGCCACGCCGGAGATGCGCCTGACCGGGATTGAGATCGCCGCTGAGGCCATCGCCTGCGCCAGACAATCGGCGGCGCAGCTCGGCCTGCAGAATCTGCATTTCCAGGCGCTCGATTCCACGCAGTTTGCTACCGGCGAAGGCGAAATTCCCGATCTGGTACTGGTGAACCCGCCGCGTCGGGGTATCGGCGATGGACTGTGCGACTATTTAAACCGTATGGCGCCGGATTTTATTATCTACTCCAGCTGCAACGCCCGCACGATGGCGAAAGATATCGCCCGGTTGAATGGCTACCGCATCGCGCGCGTCCAGCTATTCGATATGTTCCCGCATACCGCCCACTATGAGGTGTTGACCCTGCTGGTTCGCGAAGTATAA
PROTEIN sequence
Length: 377
MHCALYDAGRCRSCQWLELPVSQQLADKMADLRTLLADAPVAEWCAPVCGPESGFRNKAKMVVSGSVERPLLGMLHRDGAPEDLTDCPLYPPGFAPVFAALKPFIARAGLTPYNVARRRGELKYILLTESRLDGGMMLRFVLRSETKLAQLRAALPALQAQLPQLKVITANIQPVHMAIMEGEREIFLTDQQALAENFNGVPLWIRPQSFFQTNPAVASRLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPEMRLTGIEIAAEAIACARQSAAQLGLQNLHFQALDSTQFATGEGEIPDLVLVNPPRRGIGDGLCDYLNRMAPDFIIYSSCNARTMAKDIARLNGYRIARVQLFDMFPHTAHYEVLTLLVREV*