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NECEvent2014_3_3_scaffold_2676_1

Organism: NECEvent2014_3_3_Klebsiella_oxytoca_55_54_partial

partial RP 30 / 55 MC: 4 BSCG 25 / 51 ASCG 11 / 38 MC: 3
Location: 36..1880

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=6 Tax=Klebsiella oxytoca RepID=G8WI39_KLEOK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 614.0
  • Bit_score: 1191
  • Evalue 0.0
  • rbh
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 614.0
  • Bit_score: 1191
  • Evalue 0.0
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1328430 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 614.0
  • Bit_score: 1191
  • Evalue 0.0

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1845
ATGGAGCAAAACCCGCAGTCACAGCTGAAGCTTCTTGTCCAACGTGGTAAGGAGCAAGGCTATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGACTCCGATCAGATCGAAGACATCATCCAAATGATCAACGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTTTTGCTTGCTGAAACTAACAACAATACTGACGAAGATGCGGAAGAAGCTGCGGCGCAGGTTCTCTCCAGCGTTGAGTCTGAAATCGGACGCACTACCGACCCGGTGCGCATGTACATGCGTGAAATGGGTACCGTCGAACTGCTGACGCGCGAAGGCGAAATCGACATCGCTAAACGTATCGAAGACGGTATTAACCAGGTGCAGTGCTCGGTTGCTGAATACCCGGAAGCCATCACCTATCTGCTGGAGCAGTACGATCGCGTTGAGGCGGAAGAGGCGCGTCTGTCCGATCTGATCACCGGTTTTGTTGACCCGAACGCCGAAGAAGACATGGCGCCAACGGCGACGCACGTCGGTTCTGAACTCTCTCAGGAAGAGATGGATGACGACGAAGACGAAGATGAAGAAGAAGACGACGACAGCAGCGATGATGACAACAGCATCGATCCTGAGCTGGCGCGCGAGAAATTCGCCGAGCTGCGCACGCAGTACGAACTGACCCGCGATACCATCAAAGCGAAAGGTCGTAGCCACGCCGCAGCGCAGGAAGAGATTCTCAAGCTGTCTGAAGTGTTCAAACAGTTCCGCCTGGTGCCGAAGCAGTTCGATTACCTGGTTAACAGCATGCGCATCATGATGGATCGCGTTCGTACTCAAGAACGTATCATCATGAAGCTGTGCGTTGAGCAGTGCAAAATGCCGAAGAAAAACTTCATCACTCTGTTTACCGGCAACGAAACCAGCGAAACCTGGTTCAATGCGGCCATCGCGATGAATAAGCCGTGGTCAGAAAAGCTGCTTGACGTGAAAGAAGACGTTCAGCGCGGCCTGATGAAACTGCAGCAGATTGAACAAGAGACCGGCCTGACCATTGAGCAGGTAAAAGATATCAACCGTCGCATGTCCATAGGTGAAGCGAAAGCGCGCCGCGCGAAGAAAGAGATGGTTGAAGCGAACCTGCGTCTGGTTATCTCGATCGCCAAGAAATACACCAACCGCGGTCTGCAGTTCCTCGATCTGATCCAGGAAGGTAACATCGGTCTGATGAAAGCGGTAGATAAGTTTGAATACCGCCGCGGCTACAAGTTCTCCACCTACGCAACCTGGTGGATCCGTCAGGCGATCACCCGCTCTATCGCAGACCAGGCGCGCACCATCCGTATCCCGGTGCATATGATTGAGACTATCAACAAGCTCAACCGTATTTCCCGCCAGATGCTGCAGGAGATGGGCCGCGAACCGACGCCGGAAGAGCTGGCCGAGCGTATGCTGATGCCGGAAGATAAAATCCGTAAGGTGCTGAAAATCGCCAAAGAGCCGATCTCCATGGAAACGCCGATTGGCGACGATGAAGATTCGCATCTGGGAGATTTCATCGAGGATAACACCCTCGAGCTGCCGCTGGACTCTGCCACCACCGAGAGCCTGCGCGCCGCCACCCATGACGTTCTGGCTGGCCTGACCGCCCGTGAAGCAAAAGTCCTGCGTATGCGCTTTGGTATTGACATGAATACCGATCACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTAACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGTAAACTGCGCCATCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTCGACGATTAA
PROTEIN sequence
Length: 615
MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAPDADDLLLAETNNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTATHVGSELSQEEMDDDEDEDEEEDDDSSDDDNSIDPELAREKFAELRTQYELTRDTIKAKGRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRIMMDRVRTQERIIMKLCVEQCKMPKKNFITLFTGNETSETWFNAAIAMNKPWSEKLLDVKEDVQRGLMKLQQIEQETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDNTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD*