ggKbase home page

NECEvent2014_3_3_scaffold_415_3

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: comp(5175..6188)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=E0Q556_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 337.0
  • Bit_score: 654
  • Evalue 5.50e-185
  • rbh
Small molecule-binding regulator domain protein {ECO:0000313|EMBL:ETO95691.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifido similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 337.0
  • Bit_score: 654
  • Evalue 7.70e-185
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 337.0
  • Bit_score: 652
  • Evalue 5.90e-185

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGGCGACCATCAAGGAAATCGCAAGACGGACGGGATTCTCGCAAGCTACGGTATCTCGGTTGCTGAATGGAGATCCCACATTATCCGTCCGCGAGGAGACGCGTCGCAAGATCATTCAGGTCAGCGAGGAACTTGGCTACAGCATGCAGACCAAACGCATCGTGATTCCGCATGAGGTGGCCTTGCTTGACAACGAGGAATCCAATGAGGCGTTGCGTGATTCCTATTTCACTGATCTGCGTGCGGCACTCGAACGCAATGCTGGGCAGCAGCGTATGGAACTGACCGTGTTCCGCAATCTTGACGATATGATTGCCGAAAGTAGCGGATTTGACGGCTTTATGTCGATCGGTGCCGACCGGATCGTCGAAGAGGATCTGGAACGGTTGCATGATGCCATGCCGTATGGCGTGTTCATCGACGTGAATCCAGCGCCGGGTCTGTTTGATTCCGTACAGCCTGATCTGCAGCAGACCGTGCATGATGCCGTTGCGGCTTGTGCGGCGAAGGGAATGAAACGTGTCGGGTTCATTGGCGGCAAAGGCTGCCTGATGAACTTCTATGAGCTGGACGAAGAGAATCGCGCCACCTATTTTCGGCGTGAAGTCAAGCGTTTCGGATTGGACGCCGAGGGTCTGATCTATTCGGATGGCCTGTTTACCGTGGAGAACGGCCGCAGGCTTGGCGAACGGTTCGTGCACGATCACAACGGTGCGCTGCCGGACGCGGTGATCATCGCCGCCGATGTGATTGCGGTCGGCGTATTGCAGGCCTTCAATGCCTCCGGAGTGCTTGTGCCGCGCGACATCAGCGTGATCAGCATCAACAACCAGATGATTGCCCAGCTTACGTCACCGCCTTTGAGCACATTCGCCATCGACCAGAGCGAGCTTGCCCGCGTGGCGATCCTGACTTTGGCGGATGCCATCGCGGGCAAGCGAACCATCCGCCAGCACGCCTATCTGTCGACCTCGTTGGTCGTACGTGACAGCTTCGTGCCGGCGGAACGGTGA
PROTEIN sequence
Length: 338
MATIKEIARRTGFSQATVSRLLNGDPTLSVREETRRKIIQVSEELGYSMQTKRIVIPHEVALLDNEESNEALRDSYFTDLRAALERNAGQQRMELTVFRNLDDMIAESSGFDGFMSIGADRIVEEDLERLHDAMPYGVFIDVNPAPGLFDSVQPDLQQTVHDAVAACAAKGMKRVGFIGGKGCLMNFYELDEENRATYFRREVKRFGLDAEGLIYSDGLFTVENGRRLGERFVHDHNGALPDAVIIAADVIAVGVLQAFNASGVLVPRDISVISINNQMIAQLTSPPLSTFAIDQSELARVAILTLADAIAGKRTIRQHAYLSTSLVVRDSFVPAER*