ggKbase home page

NECEvent2014_3_3_scaffold_415_5

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: 7629..8621

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=2 Tax=Bifidobacterium dentium RepID=D2Q5M7_BIFDB similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 330.0
  • Bit_score: 671
  • Evalue 3.20e-190
  • rbh
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ETO95669.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 330.0
  • Bit_score: 680
  • Evalue 1.30e-192
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 330.0
  • Bit_score: 671
  • Evalue 9.10e-191

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGAAACAATGTCAACCGTTACAGCCTTTGGCGGTATTCTCGGATCTTTCCGAACGCATCTACTACAATCAGCCTGATCTGCCGCTGTATACACGCAATGATGCGCTCTCCCGCTTCGACTTCAGCATGGCCTGTCACTGGCATCGCGACCTGGAGTTCGTACATGCGCTCACCGGGTCGATGAAATACTTCGTCAACGGCGCGATCGTCGACATTCCGACCGGCGACGGACTGTTCGTCAATTCGAATCGGTTGCATTACGGATTCTCACCGACCCGCGAGGAATGCCATTACCCGGCGGCCGTAGTGAATCCTTCGCTGTTCGAATCATTATGGCGACCGGCGAGCGCCGAACTGGACATGCTGTGCGGGCCTGATGCACCGGATTACATGCTGTTGGATCATACTGATTCACGGCATCGGCGCATTCTGCAACTGATTGACGATACCGTGCGGTTCAACGTGCCGAATGCCGACGAAGCCGCCAATCCGCAGTCCGATACGATTCAGGCGATTGGAACGGCGATCCAATTGTGCGGGGCGGCTTTGGCGTTGGTTCGGGAGAGCATGGCGAAAGCGTCTGGTCATCCGACGACCGGACGACCGGAGCCGGCACAGGACCGGCAATCACCATCCTCAAATCATTCGGCATCGCACTCCCCCGCCAATAATCGTGATTTGATGAGTGCGTTGACCATGACCGGCTTCATTCATCAGCGTTTCCCGGAACGAATCACATTGGCCGACATCGCGGCGGCGGGTACCATGAGCCGCAGCCAATGCTGCATCGTATTTCGCGAGTATGTGAATCGCACGCCAAATGAATACCTGACCGATTACCGCATCGAGCAGGCCATGCACATGCTTTCCGGCACCGCTTCCGACGTGACCGAAGTGGCCCGTGCCTGCGGTTTTTCGACGCCCAGTTACTTCATCCGCGTATTTCGCAAGCGTGCGGGGCTCACTCCGCAACAGTGGCGGCGAGCGCACTGA
PROTEIN sequence
Length: 331
MKQCQPLQPLAVFSDLSERIYYNQPDLPLYTRNDALSRFDFSMACHWHRDLEFVHALTGSMKYFVNGAIVDIPTGDGLFVNSNRLHYGFSPTREECHYPAAVVNPSLFESLWRPASAELDMLCGPDAPDYMLLDHTDSRHRRILQLIDDTVRFNVPNADEAANPQSDTIQAIGTAIQLCGAALALVRESMAKASGHPTTGRPEPAQDRQSPSSNHSASHSPANNRDLMSALTMTGFIHQRFPERITLADIAAAGTMSRSQCCIVFREYVNRTPNEYLTDYRIEQAMHMLSGTASDVTEVARACGFSTPSYFIRVFRKRAGLTPQQWRRAH*