ggKbase home page

NECEvent2014_3_3_scaffold_844_3

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: 2730..3764

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=E0Q888_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 344.0
  • Bit_score: 670
  • Evalue 7.50e-190
  • rbh
Small molecule-binding regulator domain protein {ECO:0000313|EMBL:ETO98118.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifido similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 344.0
  • Bit_score: 672
  • Evalue 2.80e-190
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 98.8
  • Coverage: 344.0
  • Bit_score: 660
  • Evalue 2.90e-187

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium sp. MSTE12 → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
GTGACTCGCACCACCATCGCAGACGTGGCCAAGGCGGCCGGAGTATCCGTCTCCACCGTATCCCGAGCACTGCGTGGACTGGACAGAGTCAACCCCGAAACCAGAGAACGTGTCGAAAAAGAGGCCAACCGTCTCCACTTCTCCTTCTCGAAAAGCGCATCATCCCTGGCATCCGGCAAAACCATGCGTATCGCGGTGCTGTTGCCGAGCGAAATCAGCAGCTGGTTCAACTCCCACGCCTTCGAAGGCATCTACGAGGTGATGTCAAAGGCCGACTACGACGTCGTTCCCTACATCGTGTGGACGCAGGAAGATCTGGATCGTTTCTTCCAGAATCTGCCAGGCAATCGCAATGTCGACGCAATCATCGAAGCATCCTTCGACTTCGACGAGGCAAAGAAGCGGGTACTCGGCGAACTGACCATCCCTGTGGTCGGCATGAACGCCCCCAGCACGCACGGACTCGACGCCGGAGTCGCAATCGATGACGCGGCGGCCATGAGCGCAATCGTACGCTTCCTCAAGTCACTGGGACACAAGACGCTCGCCTACATCGGGCAACCTGTCAACGCCTCACCGTTCATCTGCTCGGACATCGTGCGCGAAAAAGGGTTTCTGGACGCCGCCAAGGAATGCGGCTACGGCGATGATGACATTATCATCGTGCCATCGTTGACCCATATGGACGTGCAAAACGAACAGGACATCTATTCCGGCATCGTCGCACAACTGCTCAGCGCACCAAAACAGCCGACCGGCATCTGCGTATCCGTCGACGCGGCGGCCGTTCCCCTTCTCAAGGAACTGCGCCGCATGGGATGGCGTGTGCCTCAGGATGTATCCGTAGTCGGATTCGATGACGATCCAAGCGCCTCGATTGTGGACATGACCACCATGCACCAGAATCCTACGGAAATCGGACGCATTGCGGCACGTAAGACACTCGCGTTGCTGGCAGGCGAAACCTTGGAGGAGCCGTTCTCCGTCATACCCACTTCCCTTGTGCTACGAAGCACCACGGAACGCGTGCATTGA
PROTEIN sequence
Length: 345
VTRTTIADVAKAAGVSVSTVSRALRGLDRVNPETRERVEKEANRLHFSFSKSASSLASGKTMRIAVLLPSEISSWFNSHAFEGIYEVMSKADYDVVPYIVWTQEDLDRFFQNLPGNRNVDAIIEASFDFDEAKKRVLGELTIPVVGMNAPSTHGLDAGVAIDDAAAMSAIVRFLKSLGHKTLAYIGQPVNASPFICSDIVREKGFLDAAKECGYGDDDIIIVPSLTHMDVQNEQDIYSGIVAQLLSAPKQPTGICVSVDAAAVPLLKELRRMGWRVPQDVSVVGFDDDPSASIVDMTTMHQNPTEIGRIAARKTLALLAGETLEEPFSVIPTSLVLRSTTERVH*