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NECEvent2014_3_3_scaffold_845_3

Organism: NECEvent2014_3_3_Bifidobacterium_MSTE12-rel_59_9

near complete RP 52 / 55 MC: 6 BSCG 49 / 51 ASCG 14 / 38
Location: comp(2045..3436)

Top 3 Functional Annotations

Value Algorithm Source
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1N8N9_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 463.0
  • Bit_score: 911
  • Evalue 3.40e-262
  • rbh
lytR; cell envelope-related transcriptional attenuator similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 463.0
  • Bit_score: 911
  • Evalue 1.30e-262
  • rbh
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:ADB09538.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifido similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 463.0
  • Bit_score: 911
  • Evalue 6.20e-262

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Taxonomy

Bifidobacterium dentium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1392
GTGACCTCTTCTCCTGCCGGCAACAAGCTTCCTAACATCAATGGCCTGCGCGACTCCAATCCAAGGCACAGCCTCGGGTACCGCGTGCAGCATCGCGCGCGGACCGTGGTCGCATCGGTCATCGTGGCCATGCTGGTGTTCGCGGGAACCGCAGCCGCCGCGACATGGCTGGACGTGGACAATGTCATTCAGCACCAGAAGGTGGATGTGATCGGACAAGGATCCGTGTCGGCCGAACCGACCATCATCGATCCGAATTCCGGCAAGCCGATCGAAATCCTGCTGCTCGGTCAGGACTCGCGTGACGGTGAGGGGAACCAGGCCATCGGCGGCGACATGACGGGCAATCATCAGGCCGACACTGCCATGGTGCTGCAGATTTCCGCCGACCGCTCGGCCATCAATCTGGTATCCATCCCCCGCGATTCCTTGGTCGACGTTCCACAATGTGAGACTTCCAAGGGCACCATTCCCGCGCAATACGGCGTGATGTTCAACTCGATCTTCGCCGGCGCATACCAGACCGGCGGCGATCTGGCCTCTGCGGCCAGCTGCACGCTAAACGCCGTGAACAGTCTGACCGGCCTTAACATCCAGAATTTCATCGTCGTCGATTTCGCCGGTCTGGTGAAGATGATCGATGCCATCGGCGGCGTCGACATCTGCGTGCCGCAGGATATCGATGACCCCTACTCCACGTTGCAGCTGTCCAAGGGTATGCAGCATCTCGACGGCACTCAGGCCACGCAGTACGCCCGTACCCGCTACACCTTGGGAGATGGTTCGGATACCGCCCGCACCACGCGCCAGCAGTATCTGATCAAACAGTTGATGAGCGAAGCCCTGAGCAAGAACCTGTTCACGGATACGGCACAGCTGTACCAGTTGGCGAAATCCGCACTGGAATCCCTCAATATCTCCGAAGGCATGGCCGACACCGCCGCTCTGGTCGGCCTGGCCATGAGCCTGAAGAACTTCAACATGTCGCACCTGTACACGCAGACCGTCCCAGTGGTCGCGGCGCCGTCCGATCCAAACCGATCCGTTTGGGCCGATAACGCCGACGAAGTATGGGCCAAGATGCGTGAAGGCAAGTCGCTCTTCGAATCAACCGAGACAAACGCAACCAGCACTGATTCGACGACCACCGACGGCACCACTGAATCCCAGAACACCGATGAGAATTCCGGCGAACAGGCGCAATCCACCGAAACCCCCGACGCGACGACCGGCCTCATCACCCGAGCCGACGGCACACTGATCGACCCGAACACCGGCGGCACCGTCGATCCGGAAGACGGTTCGATTCATGATGCAACCACCGGTCAGTACATCGGCATCGCAGACCGTTATCTGAATGCCACGGTATGTGCCGTTCCGGCAAAGAACTAG
PROTEIN sequence
Length: 464
VTSSPAGNKLPNINGLRDSNPRHSLGYRVQHRARTVVASVIVAMLVFAGTAAAATWLDVDNVIQHQKVDVIGQGSVSAEPTIIDPNSGKPIEILLLGQDSRDGEGNQAIGGDMTGNHQADTAMVLQISADRSAINLVSIPRDSLVDVPQCETSKGTIPAQYGVMFNSIFAGAYQTGGDLASAASCTLNAVNSLTGLNIQNFIVVDFAGLVKMIDAIGGVDICVPQDIDDPYSTLQLSKGMQHLDGTQATQYARTRYTLGDGSDTARTTRQQYLIKQLMSEALSKNLFTDTAQLYQLAKSALESLNISEGMADTAALVGLAMSLKNFNMSHLYTQTVPVVAAPSDPNRSVWADNADEVWAKMREGKSLFESTETNATSTDSTTTDGTTESQNTDENSGEQAQSTETPDATTGLITRADGTLIDPNTGGTVDPEDGSIHDATTGQYIGIADRYLNATVCAVPAKN*